<?xml version="1.0" encoding="ASCII"?>
<biogps><data><item key="owner">ArrayExpress Uploader</item><item key="ownerprofile_id">arrayexpress_sid</item><item key="species">human</item><item key="factors"><item><item key="GSM443978"><item key="GENOTYPE">WT</item><item key="AGENT">DMSO</item></item></item><item><item key="GSM443978"><item key="GENOTYPE">WT</item><item key="AGENT">DMSO</item></item></item><item><item key="GSM443978"><item key="GENOTYPE">WT</item><item key="AGENT">DMSO</item></item></item><item><item key="GSM44398"><item key="GENOTYPE">WT</item><item key="AGENT">GDC-0941 (PI3K inhibitor)</item></item></item><item><item key="GSM44398"><item key="GENOTYPE">WT</item><item key="AGENT">GDC-0941 (PI3K inhibitor)</item></item></item><item><item key="GSM44398"><item key="GENOTYPE">WT</item><item key="AGENT">GDC-0941 (PI3K inhibitor)</item></item></item><item><item key="GSM443984"><item key="GENOTYPE">PIK3CA.H1047R</item><item key="AGENT">DMSO</item></item></item><item><item key="GSM443984"><item key="GENOTYPE">PIK3CA.H1047R</item><item key="AGENT">DMSO</item></item></item><item><item key="GSM443984"><item key="GENOTYPE">PIK3CA.H1047R</item><item key="AGENT">DMSO</item></item></item><item><item key="GSM443987"><item key="GENOTYPE">PIK3CA.H1047R</item><item key="AGENT">GDC-0941 (PI3K inhibitor)</item></item></item><item><item key="GSM443987"><item key="GENOTYPE">PIK3CA.H1047R</item><item key="AGENT">GDC-0941 (PI3K inhibitor)</item></item></item><item><item key="GSM443987"><item key="GENOTYPE">PIK3CA.H1047R</item><item key="AGENT">GDC-0941 (PI3K inhibitor)</item></item></item></item><item key="id">3398</item><item key="pop_total">0</item><item key="platform">4</item><item key="summary_wrapped">The PTEN/PI3K pathway is commonly mutated in cancer and therefore represents a rational target for therapeutic intervention. In order to...</item><item key="geo_gse_id">E-GEOD-17785</item><item key="owner_profile">/profile/8773/arrayexpressuploader</item><item key="factor_count">2</item><item key="sample_count">12</item><item key="tags"><item>breast</item><item>cancer</item><item>cell</item><item>insulin</item><item>line</item><item>serum</item></item><item key="lastmodified">Dec.12, 2014</item><item key="is_default">False</item><item key="geo_id_plat">E-GEOD-17785_A-AFFY-44</item><item key="slug">endogenous-expression-of-an-oncogenic-pi3k-mutatio</item><item key="geo_gds_id"/><item key="name">Endogenous expression of an oncogenic PI3K mutation leads to activated PI3K pathway signaling and an invasive phenotype</item><item key="created">Sep.15, 2014</item><item key="summary">The PTEN/PI3K pathway is commonly mutated in cancer and therefore represents a rational target for therapeutic intervention. In order to investigate the primary phenotype(s) mediated by mutant PIK3CA in a clean and highly patient-relevant context, we utilized a non-tumorigenic MCF10A parental and isogenic knock-in cell line that harbors a common activating PIK3CA kinase domain mutation (H1047R). We found that introduction of an endogenously mutated PIK3CA primarily results in a marked epithelial-mesenchymal transition (EMT) and invasive phenotype compared to isogenic wild-type cells.  Moreover, a potent and selective inhibitor of PIK3CA (GDC-0941) was highly effective and selective on reversing this phenotype compared to cell-proliferation, highlighting a potential new paradigm for studying PI3K-pathway targeted agents.  Keywords: Expression Array Gene expression profiles from a parental MCF10A breast line and an MCF10A clone that has a PI3K activating mutation (H1047R) knocked-in. We plated the cells in 10cm dishes overnight in media with serum, but lacking EGF or insulin. DMSO or GDC-0941 (PI3K inhibitor) at an EC50 concentration were added to triplicate plates of cells in the morning. After 4 hours the RNA was harvested using the Qiagen RNeasy kit.  There are 12 samples total.</item><item key="source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-17785</item><item key="sample_source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-17785/samples/</item></data></biogps>
