<?xml version="1.0" encoding="ASCII"?>
<biogps><data><item key="owner">ArrayExpress Uploader</item><item key="ownerprofile_id">arrayexpress_sid</item><item key="species">mouse</item><item key="factors"><item><item key="GSM442052"><item key="GENOME/VARIATION">wild type, PTIP+</item><item key="DEVELOPMENTAL STAGE">1 month old</item></item></item><item><item key="GSM442053"><item key="GENOME/VARIATION">wild type, PTIP+</item><item key="DEVELOPMENTAL STAGE">2 month old</item></item></item><item><item key="GSM442054"><item key="GENOME/VARIATION">wild type, PTIP+</item><item key="DEVELOPMENTAL STAGE">3 month old</item></item></item><item><item key="GSM442055"><item key="GENOME/VARIATION">wild type, PTIP+</item><item key="DEVELOPMENTAL STAGE">4 month old</item></item></item><item><item key="GSM442056"><item key="GENOME/VARIATION">wild type, PTIP+</item><item key="DEVELOPMENTAL STAGE">5 month old</item></item></item><item><item key="GSM442057"><item key="GENOME/VARIATION">wild type, PTIP+</item><item key="DEVELOPMENTAL STAGE">6 month old</item></item></item><item><item key="GSM442058"><item key="GENOME/VARIATION">wild type, PTIP+</item><item key="DEVELOPMENTAL STAGE">7 month old</item></item></item><item><item key="GSM442059"><item key="GENOME/VARIATION">wild type, PTIP+</item><item key="DEVELOPMENTAL STAGE">8 month old</item></item></item><item><item key="GSM442060"><item key="GENOME/VARIATION">Pod-Cre, PTIP-</item><item key="DEVELOPMENTAL STAGE">9 month old</item></item></item><item><item key="GSM44206"><item key="GENOME/VARIATION">Pod-Cre, PTIP-</item><item key="DEVELOPMENTAL STAGE">10 month old</item></item></item><item><item key="GSM442062"><item key="GENOME/VARIATION">Pod-Cre, PTIP-</item><item key="DEVELOPMENTAL STAGE">11 month old</item></item></item><item><item key="GSM442063"><item key="GENOME/VARIATION">Pod-Cre, PTIP-</item><item key="DEVELOPMENTAL STAGE">12 month old</item></item></item><item><item key="GSM442064"><item key="GENOME/VARIATION">Pod-Cre, PTIP-</item><item key="DEVELOPMENTAL STAGE">13 month old</item></item></item><item><item key="GSM442065"><item key="GENOME/VARIATION">Pod-Cre, PTIP-</item><item key="DEVELOPMENTAL STAGE">14 month old</item></item></item><item><item key="GSM442066"><item key="GENOME/VARIATION">Pod-Cre, PTIP-</item><item key="DEVELOPMENTAL STAGE">15 month old</item></item></item><item><item key="GSM442067"><item key="GENOME/VARIATION">Pod-Cre, PTIP-</item><item key="DEVELOPMENTAL STAGE">16 month old</item></item></item><item><item key="GSM442068"><item key="GENOME/VARIATION">Pod-Cre, PTIP-</item><item key="DEVELOPMENTAL STAGE">17 month old</item></item></item><item><item key="GSM442069"><item key="GENOME/VARIATION">Pod-Cre, PTIP-</item><item key="DEVELOPMENTAL STAGE">18 month old</item></item></item></item><item key="id">5790</item><item key="pop_total">0</item><item key="platform">6</item><item key="summary_wrapped">Glomerular RNA comparison between wild-type and podocyte specific deletion of the PTIP gene in 1 month old kidneys. The PTIP gene was...</item><item key="geo_gse_id">E-GEOD-17709</item><item key="owner_profile">/profile/8773/arrayexpressuploader</item><item key="factor_count">2</item><item key="sample_count">18</item><item key="tags"><item>protein</item></item><item key="lastmodified">Dec.12, 2014</item><item key="is_default">False</item><item key="geo_gds_id"/><item key="slug">gene-expression-analysis-of-a-podocyte-specific-pt</item><item key="geo_id_plat">E-GEOD-17709_A-AFFY-45</item><item key="name">Gene expression analysis of a podocyte specific PTIP deletion in mouse glomerular preparations at 1 month of age</item><item key="created">Nov.11, 2014</item><item key="summary">Glomerular RNA comparison between wild-type and podocyte specific deletion of the PTIP gene in 1 month old kidneys. The PTIP gene was deleted using a floxed allele and a Podocin-Cre driver strain.  These mice develop protein urea by 3 months of age. This study was designed to find gene expression differences prior to the onset of the phenotype. A ptip floxed allele was crossed into the Podocin-Cre expressing strain to generate ptip fl/fl homozygous mice or ptip fl/- transheterozygous mice with or without the Cre expressing transgene. Animals were genotyped and assigend into two groups: Mutants with PTIP deletion (PTIP-) with the genotype ptip fl/fl:Pod-Cre or ptip fl/-:Pod-Cre or control mice (PTIP+) with either ptip fl/fl or ptip fl/-. Note that the floxed allele produced normal levels of wild-type PTIP protein.  Kidneys were excised at 1 month of age. Glomeruli enriched fractions were generated by sieving of the tissue homogenates. RNA was prepared from glomerular enriched fractions.</item><item key="source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-17709</item><item key="sample_source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-17709/samples/</item></data></biogps>
