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<biogps><data><item key="owner">ArrayExpress Uploader</item><item key="ownerprofile_id">arrayexpress_sid</item><item key="species">human</item><item key="factors"><item><item key="GSM437494"><item key="disease state">choroideremia</item><item key="cell type">monocyte</item></item></item><item><item key="GSM437494"><item key="disease state">choroideremia</item><item key="cell type">monocyte</item></item></item><item><item key="GSM437494"><item key="disease state">choroideremia</item><item key="cell type">monocyte</item></item></item><item><item key="GSM437497"><item key="disease state">choroideremia</item><item key="cell type">fibroblast</item></item></item><item><item key="GSM437497"><item key="disease state">choroideremia</item><item key="cell type">fibroblast</item></item></item><item><item key="GSM437497"><item key="disease state">choroideremia</item><item key="cell type">fibroblast</item></item></item><item><item key="GSM437497"><item key="disease state">choroideremia</item><item key="cell type">fibroblast</item></item></item><item><item key="GSM437494"><item key="disease state">choroideremia</item><item key="cell type">monocyte</item></item></item><item><item key="GSM437494"><item key="disease state">choroideremia</item><item key="cell type">monocyte</item></item></item><item><item key="GSM437494"><item key="disease state">choroideremia</item><item key="cell type">monocyte</item></item></item><item><item key="GSM437504"><item key="disease state">normal</item><item key="cell type">monocyte</item></item></item><item><item key="GSM437505"><item key="disease state">normal</item><item key="cell type">fibroblast</item></item></item><item><item key="GSM437504"><item key="disease state">normal</item><item key="cell type">monocyte</item></item></item><item><item key="GSM437504"><item key="disease state">normal</item><item key="cell type">monocyte</item></item></item><item><item key="GSM437504"><item key="disease state">normal</item><item key="cell type">monocyte</item></item></item></item><item key="id">3382</item><item key="pop_total">0</item><item key="platform">4</item><item key="summary_wrapped">Choroideremia (CHM) is a progressive X-linked retinopathy caused by mutations in the CHM gene, which encodes Rab escort protein-1...</item><item key="pubmed_id">20027300</item><item key="geo_gse_id">E-GEOD-17549</item><item key="owner_profile">/profile/8773/arrayexpressuploader</item><item key="factor_count">2</item><item key="sample_count">15</item><item key="tags"><item>choroideremia</item><item>protein</item><item>skin</item></item><item key="lastmodified">Dec.12, 2014</item><item key="is_default">False</item><item key="geo_id_plat">E-GEOD-17549_A-AFFY-44</item><item key="slug">transcription-profiling-by-array-of-human-fibrob-2</item><item key="geo_gds_id"/><item key="name">Transcription profiling by array of human fibroblasts and monocytes from patients with choroideremia</item><item key="created">Sep.12, 2014</item><item key="summary">Choroideremia (CHM) is a progressive X-linked retinopathy caused by mutations in the CHM gene, which encodes Rab escort protein-1 (REP-1), an escort protein involved in the prenylation of Rabs. Under-prenylation of certain Rabs, as a result of loss of function mutations in REP-1, could affect vesicular trafficking, exocytosis and secretion. To evaluate this hypothesis, intracellular vesicle transport, lysosomal acidification and rates of proteolytic degradation were studied in monocytes (CD14+ fraction) and primary skin fibroblasts from the nine age-matched controls and thirteen CHM patients carrying 10 different loss-of-function mutations. expression data were collected from 6 CHM patients' monocytes and 4 CHM primary fibroblasts cultures, monocytes or FB from 5 normal age-matched subjects were used as a control</item><item key="source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-17549</item><item key="sample_source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-17549/samples/</item></data></biogps>
