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<biogps><data><item key="owner">ArrayExpress Uploader</item><item key="pop_total">0</item><item key="species">human</item><item key="factors"><item><item key="GSM437493"><item key="AGE">Male 45</item><item key="GENOTYPE">HBV positive</item></item></item><item><item key="GSM437493"><item key="AGE">Male 45</item><item key="GENOTYPE">HBV positive</item></item></item><item><item key="GSM43749"><item key="AGE">Male 66</item><item key="GENOTYPE">HBV positive</item></item></item><item><item key="GSM437490"><item key="AGE">Male 65</item><item key="GENOTYPE">HBV positive</item></item></item><item><item key="GSM437489"><item key="AGE">Female 52</item><item key="GENOTYPE">HCV positive</item></item></item><item><item key="GSM437489"><item key="AGE">Female 52</item><item key="GENOTYPE">HCV positive</item></item></item><item><item key="GSM437487"><item key="AGE">Male 69</item><item key="GENOTYPE">HBV positive</item></item></item><item><item key="GSM437486"><item key="AGE">Female 48</item><item key="GENOTYPE">HBV positive</item></item></item><item><item key="GSM437485"><item key="AGE">male</item><item key="GENOTYPE">not specified</item></item></item><item><item key="GSM437485"><item key="AGE">male</item><item key="GENOTYPE">not specified</item></item></item><item><item key="GSM437485"><item key="AGE">male</item><item key="GENOTYPE">not specified</item></item></item><item><item key="GSM437485"><item key="AGE">male</item><item key="GENOTYPE">not specified</item></item></item><item><item key="GSM43748"><item key="AGE">Male 52</item><item key="GENOTYPE">HBV positive</item></item></item><item><item key="GSM437480"><item key="AGE">Male 48</item><item key="GENOTYPE">HBV positive</item></item></item><item><item key="GSM437479"><item key="AGE">Male 50</item><item key="GENOTYPE">HBV positive</item></item></item><item><item key="GSM437478"><item key="AGE">Male 64</item><item key="GENOTYPE">HBV positive</item></item></item><item><item key="GSM437477"><item key="AGE">Male 41</item><item key="GENOTYPE">HBV+HDV positive</item></item></item><item><item key="GSM437476"><item key="AGE">Male 62</item><item key="GENOTYPE">HCV positive</item></item></item><item><item key="GSM437477"><item key="AGE">Male 41</item><item key="GENOTYPE">HBV+HDV positive</item></item></item><item><item key="GSM437474"><item key="AGE">Male 60</item><item key="GENOTYPE">HBV positive</item></item></item><item><item key="GSM437474"><item key="AGE">Male 60</item><item key="GENOTYPE">HBV positive</item></item></item><item><item key="GSM437472"><item key="AGE">female</item><item key="GENOTYPE">not specified</item></item></item><item><item key="GSM43747"><item key="AGE">Male 64</item><item key="GENOTYPE">HCV positive</item></item></item><item><item key="GSM437470"><item key="AGE">Female 44</item><item key="GENOTYPE">not specified</item></item></item><item><item key="GSM437470"><item key="AGE">Female 44</item><item key="GENOTYPE">not specified</item></item></item><item><item key="GSM437468"><item key="AGE">Male 59</item><item key="GENOTYPE">HBV positive</item></item></item><item><item key="GSM43748"><item key="AGE">Male 52</item><item key="GENOTYPE">HBV positive</item></item></item><item><item key="GSM43748"><item key="AGE">Male 52</item><item key="GENOTYPE">HBV positive</item></item></item><item><item key="GSM437485"><item key="AGE">male</item><item key="GENOTYPE">not specified</item></item></item><item><item key="GSM437464"><item key="AGE">Male 56</item><item key="GENOTYPE">HBV positive</item></item></item><item><item key="GSM437464"><item key="AGE">Male 56</item><item key="GENOTYPE">HBV positive</item></item></item><item><item key="GSM437462"><item key="AGE">Female 30</item><item key="GENOTYPE">HBV positive</item></item></item><item><item key="GSM437476"><item key="AGE">Male 62</item><item key="GENOTYPE">HCV positive</item></item></item><item><item key="GSM437476"><item key="AGE">Male 62</item><item key="GENOTYPE">HCV positive</item></item></item><item><item key="GSM437459"><item key="AGE">Male 49</item><item key="GENOTYPE">HBV positive</item></item></item><item><item key="GSM437479"><item key="AGE">Male 50</item><item key="GENOTYPE">HBV positive</item></item></item><item><item key="GSM437479"><item key="AGE">Male 50</item><item key="GENOTYPE">HBV positive</item></item></item></item><item key="id">2432</item><item key="ownerprofile_id">arrayexpress_sid</item><item key="platform">4</item><item key="summary_wrapped">Hepatocellular carcinoma (HCC) is the fifth most-common cancer worldwide causing nearly 600,000 deaths esch year. Approximately 80% of...</item><item key="pubmed_id">23691139</item><item key="geo_gse_id">E-GEOD-17548</item><item key="owner_profile">/profile/8773/arrayexpressuploader</item><item key="factor_count">2</item><item key="sample_count">37</item><item key="tags"><item>cancer</item><item>carcinoma</item><item>cirrhosis</item><item>hepatocellular carcinoma</item><item>liquid</item><item>liver</item></item><item key="lastmodified">Dec.12, 2014</item><item key="is_default">False</item><item key="geo_id_plat">E-GEOD-17548_A-AFFY-44</item><item key="slug">expression-data-from-cirrhosis-and-hcc-tissue-samp</item><item key="geo_gds_id"/><item key="name">Expression data from cirrhosis and HCC tissue samples</item><item key="created">Jul.12, 2014</item><item key="summary">Hepatocellular carcinoma (HCC) is the fifth most-common cancer worldwide causing nearly 600,000 deaths esch year. Approximately 80% of HCC develops on the background of cirrhosis.It is necessary to identify novel genes involved in HCC to implement new diagnostic and treatment options. However, the molecular pathogenesis of HCC largely remains unsolved. Only a few genetic alterations, namely those affecting p53, &#946;-catenin and p16INK4a have been implicated at moderate frequencies of these cancers. Early detection of HCC with appropriate treatment can decrease tumor-related deaths We used microarrays to detail the global programme of gene expression profiles of cirrhosis and tumor liver samples. 15 cirrhosis and 15 HCC samples were collected with informed constent of each patient. Surgically resected tissues were snap frozen in liquid nitrogen and stored at -80C, and subjected to RNA extraction. Histology slides were prepared for all samples and scored by an experienced scientist. For the tumor samples, tissues were resected from inside the tumor, while tissues were resected from adjacent tissue sorrounding the tumor for non-tumor samples.</item><item key="source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-17548</item><item key="sample_source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-17548/samples/</item></data></biogps>
