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<biogps><data><item key="owner">ArrayExpress Uploader</item><item key="pop_total">0</item><item key="id">5761</item><item key="factors"><item><item key="GSM429336"><item key="TYPE">Wild-type</item><item key="TREATMENT">none</item></item></item><item><item key="GSM429336"><item key="TYPE">Wild-type</item><item key="TREATMENT">none</item></item></item><item><item key="GSM429336"><item key="TYPE">Wild-type</item><item key="TREATMENT">none</item></item></item><item><item key="GSM429336"><item key="TYPE">Wild-type</item><item key="TREATMENT">none</item></item></item><item><item key="GSM429336"><item key="TYPE">Wild-type</item><item key="TREATMENT">none</item></item></item><item><item key="GSM42934"><item key="TYPE">Wild-type</item><item key="TREATMENT">TNFa-treated</item></item></item><item><item key="GSM42934"><item key="TYPE">Wild-type</item><item key="TREATMENT">TNFa-treated</item></item></item><item><item key="GSM429343"><item key="TYPE">Wild-type</item><item key="TREATMENT">LPS-treated</item></item></item><item><item key="GSM429343"><item key="TYPE">Wild-type</item><item key="TREATMENT">LPS-treated</item></item></item><item><item key="GSM429345"><item key="TYPE">Wild-type</item><item key="TREATMENT">TSG6-treated</item></item></item><item><item key="GSM429345"><item key="TYPE">Wild-type</item><item key="TREATMENT">TSG6-treated</item></item></item><item><item key="GSM429347"><item key="TYPE">Wild-type</item><item key="TREATMENT">HA-treated</item></item></item><item><item key="GSM429347"><item key="TYPE">Wild-type</item><item key="TREATMENT">HA-treated</item></item></item><item><item key="GSM429349"><item key="TYPE">Wild-type</item><item key="TREATMENT">TSG6+HA-treated</item></item></item><item><item key="GSM429349"><item key="TYPE">Wild-type</item><item key="TREATMENT">TSG6+HA-treated</item></item></item><item><item key="GSM42935"><item key="TYPE">TSG-6 knockout</item><item key="TREATMENT">none</item></item></item><item><item key="GSM42935"><item key="TYPE">TSG-6 knockout</item><item key="TREATMENT">none</item></item></item><item><item key="GSM42935"><item key="TYPE">TSG-6 knockout</item><item key="TREATMENT">none</item></item></item><item><item key="GSM42935"><item key="TYPE">TSG-6 knockout</item><item key="TREATMENT">none</item></item></item><item><item key="GSM42935"><item key="TYPE">TSG-6 knockout</item><item key="TREATMENT">none</item></item></item><item><item key="GSM42935"><item key="TYPE">TSG-6 knockout</item><item key="TREATMENT">none</item></item></item><item><item key="GSM42935"><item key="TYPE">TSG-6 knockout</item><item key="TREATMENT">none</item></item></item><item><item key="GSM42935"><item key="TYPE">TSG-6 knockout</item><item key="TREATMENT">none</item></item></item><item><item key="GSM429359"><item key="TYPE">TSG-6 knockout</item><item key="TREATMENT">TNFa-treated</item></item></item><item><item key="GSM429359"><item key="TYPE">TSG-6 knockout</item><item key="TREATMENT">TNFa-treated</item></item></item><item><item key="GSM429359"><item key="TYPE">TSG-6 knockout</item><item key="TREATMENT">TNFa-treated</item></item></item><item><item key="GSM429359"><item key="TYPE">TSG-6 knockout</item><item key="TREATMENT">TNFa-treated</item></item></item><item><item key="GSM429363"><item key="TYPE">TSG-6 knockout</item><item key="TREATMENT">LPS-treated</item></item></item><item><item key="GSM429363"><item key="TYPE">TSG-6 knockout</item><item key="TREATMENT">LPS-treated</item></item></item><item><item key="GSM429363"><item key="TYPE">TSG-6 knockout</item><item key="TREATMENT">LPS-treated</item></item></item><item><item key="GSM429363"><item key="TYPE">TSG-6 knockout</item><item key="TREATMENT">LPS-treated</item></item></item><item><item key="GSM429367"><item key="TYPE">TSG-6 knockout</item><item key="TREATMENT">TSG6-treated</item></item></item><item><item key="GSM429367"><item key="TYPE">TSG-6 knockout</item><item key="TREATMENT">TSG6-treated</item></item></item><item><item key="GSM429367"><item key="TYPE">TSG-6 knockout</item><item key="TREATMENT">TSG6-treated</item></item></item><item><item key="GSM429370"><item key="TYPE">TSG-6 knockout</item><item key="TREATMENT">HA-treated</item></item></item><item><item key="GSM429370"><item key="TYPE">TSG-6 knockout</item><item key="TREATMENT">HA-treated</item></item></item><item><item key="GSM429370"><item key="TYPE">TSG-6 knockout</item><item key="TREATMENT">HA-treated</item></item></item><item><item key="GSM429370"><item key="TYPE">TSG-6 knockout</item><item key="TREATMENT">HA-treated</item></item></item><item><item key="GSM429374"><item key="TYPE">TSG-6 knockout</item><item key="TREATMENT">TSG6+HA-treated</item></item></item><item><item key="GSM429374"><item key="TYPE">TSG-6 knockout</item><item key="TREATMENT">TSG6+HA-treated</item></item></item><item><item key="GSM429374"><item key="TYPE">TSG-6 knockout</item><item key="TREATMENT">TSG6+HA-treated</item></item></item><item><item key="GSM429374"><item key="TYPE">TSG-6 knockout</item><item key="TREATMENT">TSG6+HA-treated</item></item></item></item><item key="ownerprofile_id">arrayexpress_sid</item><item key="platform">6</item><item key="summary_wrapped">BALB/c mice are susceptible to proteoglycan (PG) aggrecan-induced arthritis (PGIA), and the absence of TSG-6 further increases...</item><item key="pubmed_id">21566135</item><item key="geo_gse_id">E-GEOD-17160</item><item key="owner_profile">/profile/8773/arrayexpressuploader</item><item key="factor_count">2</item><item key="sample_count">42</item><item key="tags"><item>aggrecan</item><item>arthritis</item><item>fibroblast</item><item>neutrophil</item><item>proteoglycan</item></item><item key="lastmodified">Dec.12, 2014</item><item key="is_default">False</item><item key="geo_id_plat">E-GEOD-17160_A-AFFY-45</item><item key="slug">regulatory-mechanisms-of-tsg-6-tnf-alfa-induced-pr</item><item key="geo_gds_id"/><item key="name">Regulatory mechanisms of TSG-6 (TNF-alfa-induced protein-6: Tnfip6)-deficient and wild-type synovial fibroblasts</item><item key="created">Nov.11, 2014</item><item key="summary">BALB/c mice are susceptible to proteoglycan (PG) aggrecan-induced arthritis (PGIA), and the absence of TSG-6 further increases susceptibility and local inflammatory reactions, including neutrophil invasion into the joints. To gain insight into the mechanisms of TSG-6 action, synovial fibroblasts were isolated from wild-type and TSG-6-KO mice, cultured and exposed to various agents affecting either the TSG-6 expression and/or modify the intracellular function of TSG-6. In the present microarray studies, we have identified differences in gene expression by fibroblasts isolated from wild-type or TSG-6-KO mice  Keywords: Genetic modification In this study we compared the gene expression profile of 42 fibroblast cultures from mouse synovial samples. Fifteen samples were wild-type and 27 samples were TSG-6 knockout. In these two genotype groups fibroblasts were treated with TNFa, LPS, TSG-6, HA, or HA+TSG-6, and were compared to untreated samples in the same genotype group. We also compared the same treatments between KO and WT.</item><item key="source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-17160</item><item key="species">mouse</item><item key="sample_source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-17160/samples/</item></data></biogps>
