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Home › Dataset Library › Array profiling of dystrophin-deficient mice with a secondary glycosylation defect

Dataset: Array profiling of dystrophin-deficient mice with a secondary glycosylation defect

A deletion in the CMAH gene in humans occurred approximately 3.5 million years ago. This resulted in the inactivation of the CMP-Neu5Ac...

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A deletion in the CMAH gene in humans occurred approximately 3.5 million years ago. This resulted in the inactivation of the CMP-Neu5Ac hydroxylase enzyme, and hence, in the specific deficiency in N-glycolylneuraminic acid (Neu5Gc), a form of sialic acid, in all modern humans. Although there is evidence that this molecular milestone in the origin of humans may have led to the evolution of human-specific pathogens, how deficiency in Neu5Gc might alter progression of non-infectious human diseases remains unanswered. Here, we have investigated cardiac and skeletal muscle gene expression changes in mdx mice, a model of Duchenne muscular dystrophy (DMD), that do or do not carry the human-like inactivating mutation in the mouse Cmah gene. We have evidence that Neu5Gc-deficiency in humans might explain some of the discrepancies in the disease phenotype between mdx mice and DMD patients. The study had four groups of mice: 1) Wild type, 2) Cmah KO (mice carrying a human-like mutation in the Cmah gene and hence have human-like deficiency in Neu5Gc sialic acid), 3) mdx (mouse model for Duchenne Muscular Dystrophy), and 4) mdx mice deficient in Cmah. Gene expression was studied in heart and gastrocnemius muscle samples. Three replicates per group/tissue.

Species:
mouse

Samples:
24

Source:
E-GEOD-16438

PubMed:
20668298

Updated:
Dec.12, 2014

Registered:
Nov.11, 2014


Factors: (via ArrayExpress)
Sample STRAIN TISSUE GENOTYPE
GSM413159 C57BL/6J Gastrocnemius muscle wild type
GSM413159 C57BL/6J Gastrocnemius muscle wild type
GSM413159 C57BL/6J Gastrocnemius muscle wild type
GSM413162 C57BL/6J Gastrocnemius muscle Cmah KO
GSM413162 C57BL/6J Gastrocnemius muscle Cmah KO
GSM413162 C57BL/6J Gastrocnemius muscle Cmah KO
GSM413165 C57BL6/10J Gastrocnemius muscle mdx
GSM413165 C57BL6/10J Gastrocnemius muscle mdx
GSM413165 C57BL6/10J Gastrocnemius muscle mdx
GSM413168 C57BL6/10J Gastrocnemius muscle Cmah KO, mdx
GSM413168 C57BL6/10J Gastrocnemius muscle Cmah KO, mdx
GSM413168 C57BL6/10J Gastrocnemius muscle Cmah KO, mdx
GSM41317 C57BL/6J cardiac muscle wild type
GSM41317 C57BL/6J cardiac muscle wild type
GSM41317 C57BL/6J cardiac muscle wild type
GSM413174 C57BL/6J cardiac muscle Cmah KO
GSM413174 C57BL/6J cardiac muscle Cmah KO
GSM413174 C57BL/6J cardiac muscle Cmah KO
GSM413177 C57BL6/10J cardiac muscle mdx
GSM413177 C57BL6/10J cardiac muscle mdx
GSM413177 C57BL6/10J cardiac muscle mdx
GSM413180 C57BL6/10J cardiac muscle Cmah KO, mdx
GSM413180 C57BL6/10J cardiac muscle Cmah KO, mdx
GSM413180 C57BL6/10J cardiac muscle Cmah KO, mdx

Tags

  • disease
  • duchenne muscular dystrophy
  • gastrocnemius
  • heart
  • muscle
  • muscular dystrophy

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