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Home › Dataset Library › Broad defects in epidermal cornification in atopic dermatitis (AD) identified through genomic analysis

Dataset: Broad defects in epidermal cornification in atopic dermatitis (AD) identified through genomic analysis

In this study we used genomic profiling to characterize differences in expression of genes related to epidermal growth/differentiation...

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In this study we used genomic profiling to characterize differences in expression of genes related to epidermal growth/differentiation and inflammatory circuits in skin lesions of psoriasis and atopic dermatitis (AD), comparing expression values to normal skin. Skin biopsies were collected from 9 patients with chronic atopic dermatitis, 15 psoriasis patients, and 9 healthy volunteers. Keywords: Genetic-pathology Psoriasis and AD are common inflammatory skin diseases which share important features, including: 1) large infiltrates of T-cells and inflammatory dendritic cells in skin lesions, 2) immune activation with up-regulated expression of many cytokines, chemokines, and inflammatory molecules 3) marked epidermal hyperplasia in chronic diseased skin and 4) defective barrier function with increased transepidermal water loss (TEWL), which reflects underlying alterations in keratinocyte differentiation. Using genomic profiling we provide a comprehensive comparison of chronic psoriasis and AD skin lesions as compared with normal skin.

Species:
human

Samples:
18

Source:
E-GEOD-16161

PubMed:
20004782

Updated:
Dec.12, 2014

Registered:
Sep.12, 2014


Factors: (via ArrayExpress)
Sample INDIVIDUAL CONDITION
GSM405507 Patient 0002 atopic dermatitis (AD)
GSM405508 Patient 0004 atopic dermatitis (AD)
GSM405509 Patient 0005 atopic dermatitis (AD)
GSM405510 Patient 0006 atopic dermatitis (AD)
GSM4055 Patient 0007 atopic dermatitis (AD)
GSM405512 Patient 0008 atopic dermatitis (AD)
GSM405513 Patient 0009 atopic dermatitis (AD)
GSM405514 Patient 0010 atopic dermatitis (AD)
GSM405515 Patient 0011 atopic dermatitis (AD)
GSM40553 Patient 1 normal
GSM405532 Patient 2 normal
GSM405533 Patient 3 normal
GSM405534 Patient 4 normal
GSM405535 Patient 5 normal
GSM405536 Patient 6 normal
GSM405537 Patient 7 normal
GSM405538 Patient 8 normal
GSM405539 Patient 10 normal

Tags

  • atopic dermatitis
  • dendritic
  • dermatitis
  • psoriasis
  • skin

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