Dataset: Broad defects in epidermal cornification in atopic dermatitis (AD) identified through genomic analysis
In this study we used genomic profiling to characterize differences in expression of genes related to epidermal growth/differentiation...
In this study we used genomic profiling to characterize differences in expression of genes related to epidermal growth/differentiation and inflammatory circuits in skin lesions of psoriasis and atopic dermatitis (AD), comparing expression values to normal skin. Skin biopsies were collected from 9 patients with chronic atopic dermatitis, 15 psoriasis patients, and 9 healthy volunteers. Keywords: Genetic-pathology Psoriasis and AD are common inflammatory skin diseases which share important features, including: 1) large infiltrates of T-cells and inflammatory dendritic cells in skin lesions, 2) immune activation with up-regulated expression of many cytokines, chemokines, and inflammatory molecules 3) marked epidermal hyperplasia in chronic diseased skin and 4) defective barrier function with increased transepidermal water loss (TEWL), which reflects underlying alterations in keratinocyte differentiation. Using genomic profiling we provide a comprehensive comparison of chronic psoriasis and AD skin lesions as compared with normal skin.
- Species:
- human
- Samples:
- 18
- Source:
- E-GEOD-16161
- PubMed:
- 20004782
- Updated:
- Dec.12, 2014
- Registered:
- Sep.12, 2014
Sample | INDIVIDUAL | CONDITION |
---|---|---|
GSM405507 | Patient 0002 | atopic dermatitis (AD) |
GSM405508 | Patient 0004 | atopic dermatitis (AD) |
GSM405509 | Patient 0005 | atopic dermatitis (AD) |
GSM405510 | Patient 0006 | atopic dermatitis (AD) |
GSM4055 | Patient 0007 | atopic dermatitis (AD) |
GSM405512 | Patient 0008 | atopic dermatitis (AD) |
GSM405513 | Patient 0009 | atopic dermatitis (AD) |
GSM405514 | Patient 0010 | atopic dermatitis (AD) |
GSM405515 | Patient 0011 | atopic dermatitis (AD) |
GSM40553 | Patient 1 | normal |
GSM405532 | Patient 2 | normal |
GSM405533 | Patient 3 | normal |
GSM405534 | Patient 4 | normal |
GSM405535 | Patient 5 | normal |
GSM405536 | Patient 6 | normal |
GSM405537 | Patient 7 | normal |
GSM405538 | Patient 8 | normal |
GSM405539 | Patient 10 | normal |