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<biogps><data><item key="owner">ArrayExpress Uploader</item><item key="pop_total">0</item><item key="id">1208</item><item key="factors"><item><item key="GSM389680"><item key="GENOTYPE">non-CF</item></item></item><item><item key="GSM389680"><item key="GENOTYPE">non-CF</item></item></item><item><item key="GSM389680"><item key="GENOTYPE">non-CF</item></item></item><item><item key="GSM389680"><item key="GENOTYPE">non-CF</item></item></item><item><item key="GSM389680"><item key="GENOTYPE">non-CF</item></item></item><item><item key="GSM389680"><item key="GENOTYPE">non-CF</item></item></item><item><item key="GSM389680"><item key="GENOTYPE">non-CF</item></item></item><item><item key="GSM389680"><item key="GENOTYPE">non-CF</item></item></item><item><item key="GSM389680"><item key="GENOTYPE">non-CF</item></item></item><item><item key="GSM389680"><item key="GENOTYPE">non-CF</item></item></item><item><item key="GSM389680"><item key="GENOTYPE">non-CF</item></item></item><item><item key="GSM389680"><item key="GENOTYPE">non-CF</item></item></item><item><item key="GSM389680"><item key="GENOTYPE">non-CF</item></item></item><item><item key="GSM389667"><item key="GENOTYPE">CFTR D508</item></item></item><item><item key="GSM389667"><item key="GENOTYPE">CFTR D508</item></item></item><item><item key="GSM389667"><item key="GENOTYPE">CFTR D508</item></item></item><item><item key="GSM389667"><item key="GENOTYPE">CFTR D508</item></item></item><item><item key="GSM389667"><item key="GENOTYPE">CFTR D508</item></item></item><item><item key="GSM389667"><item key="GENOTYPE">CFTR D508</item></item></item><item><item key="GSM389667"><item key="GENOTYPE">CFTR D508</item></item></item><item><item key="GSM389667"><item key="GENOTYPE">CFTR D508</item></item></item><item><item key="GSM389667"><item key="GENOTYPE">CFTR D508</item></item></item><item><item key="GSM389667"><item key="GENOTYPE">CFTR D508</item></item></item><item><item key="GSM389667"><item key="GENOTYPE">CFTR D508</item></item></item><item><item key="GSM389667"><item key="GENOTYPE">CFTR D508</item></item></item><item><item key="GSM389667"><item key="GENOTYPE">CFTR D508</item></item></item><item><item key="GSM389667"><item key="GENOTYPE">CFTR D508</item></item></item><item><item key="GSM389667"><item key="GENOTYPE">CFTR D508</item></item></item><item><item key="GSM389667"><item key="GENOTYPE">CFTR D508</item></item></item></item><item key="ownerprofile_id">arrayexpress_sid</item><item key="platform">3</item><item key="summary_wrapped">Gene expression profiles were recorded from rectal suction specimens of Cystic Fibrosis (CF) patients, carrying the CF-specific D508...</item><item key="pubmed_id">24105369</item><item key="geo_gse_id">E-GEOD-15568</item><item key="owner_profile">/profile/8773/arrayexpressuploader</item><item key="factor_count">1</item><item key="sample_count">29</item><item key="tags"><item>column</item><item>cystic fibrosis</item></item><item key="lastmodified">Dec.12, 2014</item><item key="is_default">False</item><item key="geo_gds_id"/><item key="slug">gene-expression-in-rectal-epithelia-of-cystic-fibr</item><item key="geo_id_plat">E-GEOD-15568_A-AFFY-33</item><item key="name">Gene expression in rectal epithelia of cystic fibrosis patients</item><item key="created">Jun.18, 2014</item><item key="summary">Gene expression profiles were recorded from rectal suction specimens of Cystic Fibrosis (CF) patients, carrying the CF-specific D508 mutated CFTR-allele.  These profiles were compared with gene expression profiles from rectal suction specimens of non-CF subjects (control). We used Affymetrix GeneChip HG-U133A microarrays to record the gene expression profile of 16 CF and 13 non-CF individuals. Rectal suction specimens representing rectal mucosal epithelia were collected from CF patients and non-CF individuals. Biopsies were analyzed for residual function using ICM and total RNA was isolation immediately using the Qiagen RNeasy protocol with on column DNA digestion.  About 1-5 &#181;g RNA were obtained from each individual. Integrity of total RNA samples was monitored by gel-electrophoresis before cDNA synthesis. Labeled cRNA synthesis and hybridization was performed following standard protocols.</item><item key="source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-15568</item><item key="species">human</item><item key="sample_source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-15568/samples/</item></data></biogps>
