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<biogps><data><item key="owner">ArrayExpress Uploader</item><item key="pop_total">0</item><item key="id">5640</item><item key="factors"><item><item key="GSM378662"><item key="PARENTAL CELL LINE">WA</item><item key="REPLICATE">1</item><item key="VECTOR">pBabe-puro (empty vector)</item></item></item><item><item key="GSM378663"><item key="PARENTAL CELL LINE">WA</item><item key="REPLICATE">2</item><item key="VECTOR">pBabe-puro (empty vector)</item></item></item><item><item key="GSM378664"><item key="PARENTAL CELL LINE">WA</item><item key="REPLICATE">3</item><item key="VECTOR">pBabe-puro (empty vector)</item></item></item><item><item key="GSM378665"><item key="PARENTAL CELL LINE">WB</item><item key="REPLICATE">1</item><item key="VECTOR">pBabe-puro (empty vector)</item></item></item><item><item key="GSM378666"><item key="PARENTAL CELL LINE">WB</item><item key="REPLICATE">2</item><item key="VECTOR">pBabe-puro (empty vector)</item></item></item><item><item key="GSM378667"><item key="PARENTAL CELL LINE">WB</item><item key="REPLICATE">3</item><item key="VECTOR">pBabe-puro (empty vector)</item></item></item><item><item key="GSM378668"><item key="PARENTAL CELL LINE">WC</item><item key="REPLICATE">1</item><item key="VECTOR">pBabe-puro (empty vector)</item></item></item><item><item key="GSM378669"><item key="PARENTAL CELL LINE">WC</item><item key="REPLICATE">2</item><item key="VECTOR">pBabe-puro (empty vector)</item></item></item><item><item key="GSM378670"><item key="PARENTAL CELL LINE">WC</item><item key="REPLICATE">3</item><item key="VECTOR">pBabe-puro (empty vector)</item></item></item><item><item key="GSM37867"><item key="PARENTAL CELL LINE">WA</item><item key="REPLICATE">1</item><item key="VECTOR">pBabe-human c-myc (c-myc vector)</item></item></item><item><item key="GSM378672"><item key="PARENTAL CELL LINE">WA</item><item key="REPLICATE">2</item><item key="VECTOR">pBabe-human c-myc (c-myc vector)</item></item></item><item><item key="GSM378673"><item key="PARENTAL CELL LINE">WA</item><item key="REPLICATE">3</item><item key="VECTOR">pBabe-human c-myc (c-myc vector)</item></item></item><item><item key="GSM378674"><item key="PARENTAL CELL LINE">WB</item><item key="REPLICATE">1</item><item key="VECTOR">pBabe-human c-myc (c-myc vector)</item></item></item><item><item key="GSM378675"><item key="PARENTAL CELL LINE">WB</item><item key="REPLICATE">2</item><item key="VECTOR">pBabe-human c-myc (c-myc vector)</item></item></item><item><item key="GSM378676"><item key="PARENTAL CELL LINE">WB</item><item key="REPLICATE">3</item><item key="VECTOR">pBabe-human c-myc (c-myc vector)</item></item></item><item><item key="GSM378677"><item key="PARENTAL CELL LINE">WC</item><item key="REPLICATE">1</item><item key="VECTOR">pBabe-human c-myc (c-myc vector)</item></item></item><item><item key="GSM378678"><item key="PARENTAL CELL LINE">WC</item><item key="REPLICATE">2</item><item key="VECTOR">pBabe-human c-myc (c-myc vector)</item></item></item><item><item key="GSM378679"><item key="PARENTAL CELL LINE">WC</item><item key="REPLICATE">3</item><item key="VECTOR">pBabe-human c-myc (c-myc vector)</item></item></item><item><item key="GSM378680"><item key="PARENTAL CELL LINE">WA</item><item key="REPLICATE">1</item><item key="VECTOR">pBabe-human v-src (v-src vector)</item></item></item><item><item key="GSM37868"><item key="PARENTAL CELL LINE">WA</item><item key="REPLICATE">2</item><item key="VECTOR">pBabe-human v-src (v-src vector)</item></item></item><item><item key="GSM378682"><item key="PARENTAL CELL LINE">WA</item><item key="REPLICATE">3</item><item key="VECTOR">pBabe-human v-src (v-src vector)</item></item></item><item><item key="GSM378683"><item key="PARENTAL CELL LINE">WB</item><item key="REPLICATE">2</item><item key="VECTOR">pBabe-human v-src (v-src vector)</item></item></item><item><item key="GSM378684"><item key="PARENTAL CELL LINE">WB</item><item key="REPLICATE">3</item><item key="VECTOR">pBabe-human v-src (v-src vector)</item></item></item><item><item key="GSM378685"><item key="PARENTAL CELL LINE">WC</item><item key="REPLICATE">1</item><item key="VECTOR">pBabe-human v-src (v-src vector)</item></item></item><item><item key="GSM378686"><item key="PARENTAL CELL LINE">WC</item><item key="REPLICATE">2</item><item key="VECTOR">pBabe-human v-src (v-src vector)</item></item></item><item><item key="GSM378687"><item key="PARENTAL CELL LINE">WC</item><item key="REPLICATE">3</item><item key="VECTOR">pBabe-human v-src (v-src vector)</item></item></item></item><item key="ownerprofile_id">arrayexpress_sid</item><item key="platform">6</item><item key="summary_wrapped">Cultured cancer cells exhibit substantial phenotypic heterogeneity when measured in a variety of ways such as sensitivity to drugs or the...</item><item key="pubmed_id">19483725</item><item key="geo_gse_id">E-GEOD-15161</item><item key="owner_profile">/profile/8773/arrayexpressuploader</item><item key="factor_count">3</item><item key="sample_count">26</item><item key="tags"><item>breast</item><item>breast cancer</item><item>cancer</item><item>cell</item><item>genome</item><item>lung</item><item>semisolid</item></item><item key="lastmodified">Dec.12, 2014</item><item key="is_default">False</item><item key="geo_gds_id"/><item key="slug">expression-data-from-retroviral-vector-infected-im</item><item key="geo_id_plat">E-GEOD-15161_A-AFFY-45</item><item key="name">Expression data from retroviral vector-infected immortalized mouse embryonic fibroblasts (MEFs)</item><item key="created">Nov.11, 2014</item><item key="summary">Cultured cancer cells exhibit substantial phenotypic heterogeneity when measured in a variety of ways such as sensitivity to drugs or the capacity to grow under various conditions.  Among these, the ability to exhibit anchorage-independent cell growth (colony forming capacity in semisolid media) has been considered to be fundamental in cancer biology because it has been connected with tumor cell aggressiveness in vivo such as tumorigenic and metastatic potentials, and also utilized as a marker for in vitro transformation.  Although multiple genetic factors for anchorage-independence have been identified, the molecular basis for this capacity is still largely unknown.  To investigate the molecular mechanisms underlying anchorage-independent cell growth, we have used genome-wide DNA microarray studies to develop an expression signature associated with this phenotype.  Using this signature, we identify a program of activated mitochondrial biogenesis associated with the phenotype of anchorage-independent growth and importantly, we demonstrate that this phenotype predicts potential for metastasis in primary breast and lung tumors.  Keywords: c-Myc or v-Src retroviral vector-infected immortalized mouse embryonic fibroblasts. Expression data of c-Myc and v-Src transformed MEFs was used to validate an expression signature generated from human cultured breast cancer cell lines with anchorage-independent growth ability.</item><item key="source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-15161</item><item key="species">mouse</item><item key="sample_source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-15161/samples/</item></data></biogps>
