<?xml version="1.0" encoding="ASCII"?>
<biogps><data><item key="owner">ArrayExpress Uploader</item><item key="pop_total">0</item><item key="species">human</item><item key="factors"><item><item key="GSM366057 1"/></item><item><item key="GSM366058 1"/></item><item><item key="GSM366059 1"/></item><item><item key="GSM366060 1"/></item><item><item key="GSM366061 1"/></item><item><item key="GSM366062 1"/></item><item><item key="GSM366063 1"/></item><item><item key="GSM366064 1"/></item><item><item key="GSM366065 1"/></item><item><item key="GSM366066 1"/></item><item><item key="GSM366067 1"/></item><item><item key="GSM366068 1"/></item><item><item key="GSM366069 1"/></item><item><item key="GSM366070 1"/></item><item><item key="GSM366071 1"/></item><item><item key="GSM366072 1"/></item></item><item key="id">3159</item><item key="ownerprofile_id">arrayexpress_sid</item><item key="platform">4</item><item key="summary_wrapped">Background:  The dramatic clinical course of acute liver failure has posed major limitations for pathogenesis studies. We used gene...</item><item key="geo_gse_id">E-GEOD-14668</item><item key="owner_profile">/profile/8773/arrayexpressuploader</item><item key="factor_count">0</item><item key="sample_count">16</item><item key="tags"><item>cell</item><item>hepatitis</item><item>hepatitis b</item><item>immunoglobulin</item><item>liver</item></item><item key="lastmodified">Dec.12, 2014</item><item key="is_default">False</item><item key="geo_gds_id"/><item key="slug">b-cell-gene-signature-in-hbv-associated-acute-live</item><item key="geo_id_plat">E-GEOD-14668_A-AFFY-44</item><item key="name">B-Cell Gene Signature in HBV-Associated Acute Liver Failure</item><item key="created">Sep.11, 2014</item><item key="summary">Background:  The dramatic clinical course of acute liver failure has posed major limitations for pathogenesis studies. We used gene expression profiling to establish a molecular definition of hepatitis B virus (HBV)-associated acute liver failure. Methods:  Two patients who underwent liver transplantation for HBV-associated acute liver failure were studied. Gene expression profiling was performed on 8 liver specimens obtained from the two patients with acute liver failure (4 samples per liver) and individual liver specimens from 8 liver donors. Statistical analyses were used to identify the signature genes of HBV-associated acute liver failure. Results:  Multivariate permutation analysis identified 1,368 transcripts that were differentially expressed in acute liver failure; 709 were up-regulated and 659 down-regulated. The most represented up-regulated transcripts were those involved in the immune response, whereas the most abundant down-regulated transcripts were those involved in metabolism and hepatic synthesis. Acute liver failure was characterized by an overriding B-cell signature comprising genes related to mature B cells and plasma cells with abundant polyclonal expression of immunoglobulin genes. By contrast, there was a limited T-cell signature and up-regulation of several inhibitors of T-cell activation. Immunohistochemical analysis confirmed the prominent B-cell signature showing diffuse liver infiltration by plasma blasts and plasma cells with strong cytoplasmic staining for IgM and IgG, associated with a significant deposition of complement factors. Conclusions:  The presence of a prominent intrahepatic plasma-cell infiltrate with ectopic immunoglobulin production and complement deposition suggests a pivotal role of humoral immunity in the pathogenesis of acute liver failure associated with HBV infection.  Keywords: Expression prrofiling by array Liver samples were obtained from  explanted livers of two patients with HBV-associated acute liver failure (4 samples per liver) and 8 individual normal liver donors and gene expression profiling was used to establish a molecular definition of acute liver failure.</item><item key="source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-14668</item><item key="sample_source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-14668/samples/</item></data></biogps>
