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<biogps><data><item key="owner">ArrayExpress Uploader</item><item key="pop_total">0</item><item key="species">mouse</item><item key="factors"><item><item key="GSM358679"><item key="AGE">121 days</item></item></item><item><item key="GSM358680"><item key="AGE">203 days</item></item></item><item><item key="GSM35868"><item key="AGE">165 days</item></item></item><item><item key="GSM358682"><item key="AGE">132 days</item></item></item><item><item key="GSM358683"><item key="AGE">125 days</item></item></item><item><item key="GSM358684"><item key="AGE">148 days</item></item></item><item><item key="GSM358685"><item key="AGE">71 days</item></item></item><item><item key="GSM358686"><item key="AGE">179 days</item></item></item><item><item key="GSM358687"><item key="AGE">145 days</item></item></item><item><item key="GSM358679"><item key="AGE">121 days</item></item></item><item><item key="GSM358679"><item key="AGE">121 days</item></item></item><item><item key="GSM358690"><item key="AGE">140 days</item></item></item><item><item key="GSM35869"><item key="AGE">106 days</item></item></item><item><item key="GSM358692"><item key="AGE">118 days</item></item></item></item><item key="id">8387</item><item key="ownerprofile_id">arrayexpress_sid</item><item key="platform">8</item><item key="summary_wrapped">Expression profiling of thymic lymphomas derived from HIF1a+/+, p53R270H/R270H; HIF1a+/-, p53R270H/R270H; and HIF1aKI/+, p53R270H/R270H...</item><item key="pubmed_id">19293180</item><item key="geo_gse_id">E-GEOD-14336</item><item key="owner_profile">/profile/8773/arrayexpressuploader</item><item key="factor_count">1</item><item key="sample_count">14</item><item key="tags"><item>disease</item><item>lymphoma</item><item>notch</item></item><item key="lastmodified">Dec.12, 2014</item><item key="is_default">False</item><item key="geo_gds_id"/><item key="slug">expression-profiling-of-thymic-lymphomas-from-p53</item><item key="geo_id_plat">E-GEOD-14336_A-AFFY-36</item><item key="name">Expression profiling of thymic lymphomas from p53 mutant (R270H) mice with varying HIF levels</item><item key="created">Nov.24, 2014</item><item key="summary">Expression profiling of thymic lymphomas derived from HIF1a+/+, p53R270H/R270H; HIF1a+/-, p53R270H/R270H; and HIF1aKI/+, p53R270H/R270H mice.  HIF1a and HIF2a share a high degree of sequence homology, but recent work has shown that the two a subunits can have contrasting and tissue-specific effects on tumor growth. To directly compare the role of each HIFa subunit in spontaneous tumorigenesis, we bred a mouse model of expanded HIF2a expression and Hif1a+/- mice to homozygotes for the R270H mutation in p53.  Heterozygosity for Hif1a significantly reduced the incidence of thymic lymphomas observed in this model. Moreover, reduced Hif1a levels correlated with decreased stabilization of activated Notch1 and expression of the Notch target genes, Dtx1 and Nrarp.  Keywords: genetic modification, disease state analysis Thymic lymphoma tissue was preserved at the time mice were sacrificed. 4-5 samples from each of 3 genotypes (HIF1a+/-, p53R270H/R270H, HIF1aKI/+; p53R270H/R270H; and HIF1a+/+, p53R270H/R270H) were then used for microarray analysis to identify differences in gene expression that could account for changes in tumor onset and incidence.</item><item key="source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-14336</item><item key="sample_source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-14336/samples/</item></data></biogps>
