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Home › Dataset Library › Smoking-dependent Reprogramming of Alveolar Macrophage Polarization: Implication for Pathogenesis of COPD

Dataset: Smoking-dependent Reprogramming of Alveolar Macrophage Polarization: Implication for Pathogenesis of COPD

Background: When exposed to specific stimuli, macrophages exhibit distinct activation programs, M1 and M2 polarization, that define...

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Background: When exposed to specific stimuli, macrophages exhibit distinct activation programs, M1 and M2 polarization, that define macrophage function as inflammatory/immune effectors or anti-inflammatory/tissue remodeling cells, respectively. Due to their position on the lung epithelial surface, alveolar macrophages (AM) directly interact with environmental stimuli such as cigarette smoke, the major risk factor for the development of chronic obstructive pulmonary disease (COPD). Based on the current paradigm that, in response to smoking, AM contribute to both inflammatory and tissue remodeling processes in the lung relevant to the pathogenesis of COPD, we hypothesized that chronic exposure to cigarette smoking activates both the M1 and M2 polarization programs in AM. Methods and Findings: To assess this hypothesis, global transcriptional profiling with TaqMan confirmation and flow cytometry analysis was carried out on AM obtained by bronchoalveolar lavage of 24 healthy nonsmokers, 34 healthy smokers and 12 smokers with COPD to assess the expression of 41 M1 genes and 32 M2 genes in each group. Contrary to our expectations, while there was up-regulation of some genes typical for M2-related phenotypes, AM of healthy smokers exhibited substantial suppression of M1-related inflammatory/immune genes. These M1- and M2-related changes progressed with the development of smoking-induced lung disease, with AM of smokers with COPD exhibiting further down-regulation of M1-related genes accompanied with further up-regulation of some M2-related genes. Conclusion: The data demonstrates that the modifications of the AM transcriptome associated with smoking result in a unique phenotype characterized by reprogramming of AM towards M1-deactivated partially M2-polarized macrophages and suggests that, while AM likely contribute to smoking-induced tissue remodeling, the role of AM in the early pathogenesis of smoking-induced COPD in humans is not inflammatory. This concept is a departure from the conventional concept that AM-mediated inflammation participates in the early derangements of the lung induced by smoking, and suggests a novel paradigm for conceptualizing COPD and developing new approaches to prevent the development of smoking-induced lung disease. Comparison of gene expression in alveolar macrophages of normal non-smokers and normal smokers and smokers with COPD

Species:
human

Samples:
70

Source:
E-GEOD-13896

PubMed:
19635926

Updated:
Dec.12, 2014

Registered:
Sep.11, 2014


Factors: (via ArrayExpress)
Sample AGE ANCESTRY SMOKING STATUS SEX
GSM21924 41 African non-smoker M
GSM219242 61 European non-smoker M
GSM219243 37 African non-smoker F
GSM219244 35 African non-smoker M
GSM219245 47 African non-smoker M
GSM219246 36 European non-smoker M
GSM219247 45 Hispanic non-smoker M
GSM219248 45 European non-smoker M
GSM219249 49 European non-smoker F
GSM219250 38 Hispanic non-smoker M
GSM219248 45 European non-smoker M
GSM219252 37 African smoker, 23 pack-years F
GSM219253 46 European smoker, 21 pack-years M
GSM219254 not specified not specified not specified not specified
GSM219256 44 European smoker, 45 pack-years M
GSM219257 48 European smoker, 15 pack-years M
GSM219258 40 African smoker, 24 pack-years M
GSM219259 48 European smoker, 20 pack-years M
GSM219260 50 European smoker, 38 pack-years M
GSM21926 45 African smoker, 24 pack-years M
GSM219262 56 African smoker, 80 pack-years M
GSM219263 59 European smoker, 60 pack-years M
GSM219264 45 African smoker, 70 pack-years M
GSM349912 47 European non-smoker M
GSM349913 49 African non-smoker F
GSM349914 34 African non-smoker M
GSM349915 42 African non-smoker M
GSM349916 41 African non-smoker F
GSM219244 35 African non-smoker M
GSM349918 34 African non-smoker F
GSM349919 26 African non-smoker M
GSM349920 24 African non-smoker M
GSM34992 39 African non-smoker M
GSM349922 37 African non-smoker M
GSM349923 29 Hispanic non-smoker M
GSM349924 48 African non-smoker F
GSM349925 39 Hispanic smoker, 30 pack-years M
GSM349926 41 African smoker, 45 pack-years M
GSM349927 41 African smoker, 15 pack-years M
GSM349928 45 European smoker, 23 pack-years M
GSM349929 50 African smoker, 22 pack-years F
GSM349930 46 European smoker, 33 pack-years F
GSM34993 43 African smoker, 30 pack-years M
GSM349932 36 Hispanic smoker, 3 pack-years M
GSM349933 46 African smoker, 19 pack-years F
GSM349934 47 African smoker, 11 pack-years M
GSM349935 41 European smoker, 12 pack-years M
GSM349936 42 European smoker, 20 pack-years F
GSM349937 46 Hispanic smoker, 26 pack-years M
GSM349938 32 African smoker, 7.6 pack-years F
GSM349939 27 African smoker, 3.8 pack-years F
GSM349940 35 African smoker, 5 pack-years M
GSM34994 40 African smoker, 44.3 pack-years M
GSM349942 41 African smoker, 38 pack-years M
GSM349943 38 African smoker, 20 pack-years M
GSM349944 27 European smoker, 16 pack-years F
GSM349945 48 Hispanic smoker, 51 pack-years M
GSM349946 21 African smoker, 20 pack-years F
GSM349947 47 European COPD, GOLD-I, 50 pack-years M
GSM349948 59 European COPD, GOLD-I, 48 pack-years M
GSM349949 56 European COPD, GOLD-I, 35 pack-years M
GSM349950 71 European COPD, GOLD-III, 87 pack-years F
GSM34995 46 African COPD, GOLD-II, 27 pack-years M
GSM349952 56 European COPD, GOLD-II, 60 pack-years M
GSM349953 58 European COPD, GOLD-II, 75 pack-years M
GSM349954 52 Hispanic COPD, GOLD-I, 23 pack-years M
GSM349955 36 Hispanic COPD, GOLD-I, 32.5 pack-years M
GSM349956 49 European COPD, GOLD-I, 27 pack-years M
GSM349957 66 European COPD, GOLD-I, 119 pack-years M
GSM349958 54 Hispanic COPD, GOLD-I, 34.5 pack-years F

Tags

  • chronic obstructive pulmonary disease
  • disease
  • lung
  • lung disease
  • macrophage
  • surface

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