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<biogps><data><item key="platform">4</item><item key="owner">ArrayExpress Uploader</item><item key="pop_total">0</item><item key="species">human</item><item key="factors"><item><item key="GSE13762GSM346553"><item key="time">0</item><item key="dose">  </item><item key="cell type">CD14-positive monocyte</item><item key="compound">none</item></item></item><item><item key="GSE13762GSM346557"><item key="time">5</item><item key="dose">  </item><item key="cell type">immature dendritic cell</item><item key="compound">vehicle</item></item></item><item><item key="GSE13762GSM346558"><item key="time">5</item><item key="dose">10</item><item key="cell type">immature dendritic cell</item><item key="compound">1,25-dihydroxyvitamin D3 </item></item></item><item><item key="GSE13762GSM346559"><item key="time">12</item><item key="dose">  </item><item key="cell type">differentiating dendritic cell</item><item key="compound">vehicle</item></item></item><item><item key="GSE13762GSM346562"><item key="time">12</item><item key="dose">10</item><item key="cell type">differentiating dendritic cell</item><item key="compound">1,25-dihydroxyvitamin D3 </item></item></item><item><item key="GSE13762GSM346553"><item key="time">0</item><item key="dose">  </item><item key="cell type">CD14-positive monocyte</item><item key="compound">none</item></item></item><item><item key="GSE13762GSM346557"><item key="time">5</item><item key="dose">  </item><item key="cell type">immature dendritic cell</item><item key="compound">vehicle</item></item></item><item><item key="GSE13762GSM346558"><item key="time">5</item><item key="dose">10</item><item key="cell type">immature dendritic cell</item><item key="compound">1,25-dihydroxyvitamin D3 </item></item></item><item><item key="GSE13762GSM346559"><item key="time">12</item><item key="dose">  </item><item key="cell type">differentiating dendritic cell</item><item key="compound">vehicle</item></item></item><item><item key="GSE13762GSM346562"><item key="time">12</item><item key="dose">10</item><item key="cell type">differentiating dendritic cell</item><item key="compound">1,25-dihydroxyvitamin D3 </item></item></item><item><item key="GSE13762GSM346553"><item key="time">0</item><item key="dose">  </item><item key="cell type">CD14-positive monocyte</item><item key="compound">none</item></item></item><item><item key="GSE13762GSM346557"><item key="time">5</item><item key="dose">  </item><item key="cell type">immature dendritic cell</item><item key="compound">vehicle</item></item></item><item><item key="GSE13762GSM346558"><item key="time">5</item><item key="dose">10</item><item key="cell type">immature dendritic cell</item><item key="compound">1,25-dihydroxyvitamin D3 </item></item></item><item><item key="GSE13762GSM346559"><item key="time">12</item><item key="dose">  </item><item key="cell type">differentiating dendritic cell</item><item key="compound">vehicle</item></item></item><item><item key="GSE13762GSM346562"><item key="time">12</item><item key="dose">10</item><item key="cell type">differentiating dendritic cell</item><item key="compound">1,25-dihydroxyvitamin D3 </item></item></item></item><item key="id">3103</item><item key="ownerprofile_id">arrayexpress_sid</item><item key="source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-13762</item><item key="summary_wrapped">We have carried out global gene expression analysis to clarify the interrelationship between 1,25-dihydroxyvitamin D3 and...</item><item key="pubmed_id">19201860</item><item key="owner_profile">/profile/8773/arrayexpressuploader</item><item key="factor_count">4</item><item key="sample_count">15</item><item key="tags"><item>cell</item><item>dendritic</item><item>genome</item><item>monocyte</item></item><item key="lastmodified">Dec.12, 2014</item><item key="is_default">False</item><item key="geo_gds_id"/><item key="slug">transcription-profiling-by-array-of-human-monocy-3</item><item key="geo_id_plat">E-GEOD-13762_A-AFFY-44</item><item key="name">Transcription profiling by array of human monocyte-derived dendritic cells treated with 1,25-dihydroxyvitamin D3</item><item key="created">Sep.11, 2014</item><item key="summary">We have carried out global gene expression analysis to clarify the interrelationship between 1,25-dihydroxyvitamin D3 and differentiation-driven gene expression patterns in developing human monocyte-derived dendritic cells. Monocytes were treated with 10 nM 1,25-dihydroxyvitamin D3 or vehicle 14 hours after plating for 12 hours or 5 days. Monocytes, differentiating dendritic cells (+/-1,25-dihydroxyvitamin D3 for 12 hours) and immature dendritic cells (+/-1,25-dihydroxyvitamin D3 for 5 days) were harvested. This design allows one to identify genes regulated by differentiation and/or 1,25-dihydroxyvitamin D3 in human monocyte-derived dendritic cells. Experiment Overall Design: Human monocytes were obtained from buffy coats from healthy donors by Ficoll gradient centrifugation followed by immunomagnetic cell separation with anti-CD14-conjugated microbeads. Monocytes were cultured in RPMI-1640 supplemented with 10% FBS, 800 U/ml GM-CSF and 500 U/ml IL-4. Monocytes were treated with 10 nM 1,25-dihydroxyvitamin D3 or vehicle 14 hours after plating for 12 hours or 5 days. Monocytes, differentiating dendritic cells (+/-1,25-dihydroxyvitamin D3 for 12 hours) and immature dendritic cells (+/-1,25-dihydroxyvitamin D3 for 5 days) were harvested. Experiments were performed in biological triplicates representing samples from different donors. 15 samples were processed and hybridized to Human Genome U133 Plus 2.0 Arrays.</item><item key="geo_gse_id">E-GEOD-13762</item><item key="sample_source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-13762/samples/</item></data></biogps>
