<?xml version="1.0" encoding="ASCII"?>
<biogps><data><item key="owner">ArrayExpress Uploader</item><item key="ownerprofile_id">arrayexpress_sid</item><item key="species">human</item><item key="factors"><item><item key="GSE12777GSM320590"><item key="cell line">BT20</item><item key="cell type">Basal</item><item key="genotype">wild_type</item></item></item><item><item key="GSE12777GSM320591"><item key="cell line">KPL4</item><item key="cell type">Luminal</item><item key="genotype">HER2 amplification</item></item></item><item><item key="GSE12777GSM320592"><item key="cell line">MDA-MB-134VI</item><item key="cell type">Basal</item><item key="genotype">wild_type</item></item></item><item><item key="GSE12777GSM320593"><item key="cell line">MX1</item><item key="cell type">Basal</item><item key="genotype">wild_type</item></item></item><item><item key="GSE12777GSM320594"><item key="cell line">HCC1806</item><item key="cell type">Basal</item><item key="genotype">wild_type</item></item></item><item><item key="GSE12777GSM320595"><item key="cell line">AU565</item><item key="cell type">Luminal</item><item key="genotype">HER2 amplification</item></item></item><item><item key="GSE12777GSM320596"><item key="cell line">BT474</item><item key="cell type">Luminal</item><item key="genotype">HER2 amplification</item></item></item><item><item key="GSE12777GSM320597"><item key="cell line">BT483</item><item key="cell type">Luminal</item><item key="genotype">wild_type</item></item></item><item><item key="GSE12777GSM320598"><item key="cell line">BT-549</item><item key="cell type">Basal</item><item key="genotype">wild_type</item></item></item><item><item key="GSE12777GSM320599"><item key="cell line">CAMA-1</item><item key="cell type">Luminal</item><item key="genotype">wild_type</item></item></item><item><item key="GSE12777GSM320600"><item key="cell line">DU4475</item><item key="cell type">Basal</item><item key="genotype">wild_type</item></item></item><item><item key="GSE12777GSM320601"><item key="cell line">Hs578T</item><item key="cell type">Basal</item><item key="genotype">wild_type</item></item></item><item><item key="GSE12777GSM320602"><item key="cell line">MCF7</item><item key="cell type">Luminal</item><item key="genotype">wild_type</item></item></item><item><item key="GSE12777GSM320603"><item key="cell line">MDA-MB-175VII</item><item key="cell type">Luminal</item><item key="genotype">wild_type</item></item></item><item><item key="GSE12777GSM320604"><item key="cell line">MDA-MB-231</item><item key="cell type">Basal</item><item key="genotype">wild_type</item></item></item><item><item key="GSE12777GSM320605"><item key="cell line">MDA-MB-361</item><item key="cell type">Luminal</item><item key="genotype">HER2 amplification</item></item></item><item><item key="GSE12777GSM320606"><item key="cell line">MDA-MB-415</item><item key="cell type">Luminal</item><item key="genotype">wild_type</item></item></item><item><item key="GSE12777GSM320607"><item key="cell line">MDA-MB-435s</item><item key="cell type">Basal</item><item key="genotype">wild_type</item></item></item><item><item key="GSE12777GSM320608"><item key="cell line">MDA-MB-436</item><item key="cell type">Basal</item><item key="genotype">wild_type</item></item></item><item><item key="GSE12777GSM320609"><item key="cell line">MDA-MB-453</item><item key="cell type">Luminal</item><item key="genotype">HER2 amplification</item></item></item><item><item key="GSE12777GSM320610"><item key="cell line">MDA-MB-468</item><item key="cell type">Basal</item><item key="genotype">wild_type</item></item></item><item><item key="GSE12777GSM320611"><item key="cell line">SKBR3</item><item key="cell type">Luminal</item><item key="genotype">HER2 amplification</item></item></item><item><item key="GSE12777GSM320612"><item key="cell line">T47D</item><item key="cell type">Luminal</item><item key="genotype">wild_type</item></item></item><item><item key="GSE12777GSM320613"><item key="cell line">UACC-812</item><item key="cell type">Luminal</item><item key="genotype">HER2 amplification</item></item></item><item><item key="GSE12777GSM320614"><item key="cell line">ZR75-1</item><item key="cell type">Luminal</item><item key="genotype">wild_type</item></item></item><item><item key="GSE12777GSM320615"><item key="cell line">CAL-120</item><item key="cell type">Basal</item><item key="genotype">wild_type</item></item></item><item><item key="GSE12777GSM320616"><item key="cell line">CAL-51</item><item key="cell type">Basal</item><item key="genotype">wild_type</item></item></item><item><item key="GSE12777GSM320617"><item key="cell line">CAL85-1</item><item key="cell type">Basal</item><item key="genotype">wild_type</item></item></item><item><item key="GSE12777GSM320618"><item key="cell line">EFM19</item><item key="cell type">Luminal</item><item key="genotype">wild_type</item></item></item><item><item key="GSE12777GSM320619"><item key="cell line">EFM-192A</item><item key="cell type">Luminal</item><item key="genotype">HER2 amplification</item></item></item><item><item key="GSE12777GSM320620"><item key="cell line">EVSA-T</item><item key="cell type">Luminal</item><item key="genotype">wild_type</item></item></item><item><item key="GSE12777GSM320621"><item key="cell line">HCC1937</item><item key="cell type">Basal</item><item key="genotype">wild_type</item></item></item><item><item key="GSE12777GSM320622"><item key="cell line">KPL1</item><item key="cell type">Luminal</item><item key="genotype">wild_type</item></item></item><item><item key="GSE12777GSM320623"><item key="cell line">HCC202</item><item key="cell type">Luminal</item><item key="genotype">HER2 amplification</item></item></item><item><item key="GSE12777GSM320624"><item key="cell line">HCC1419</item><item key="cell type">Luminal</item><item key="genotype">HER2 amplification</item></item></item><item><item key="GSE12777GSM320625"><item key="cell line">HCC70</item><item key="cell type">Basal</item><item key="genotype">wild_type</item></item></item><item><item key="GSE12777GSM320626"><item key="cell line">HCC1428</item><item key="cell type">Luminal</item><item key="genotype">wild_type</item></item></item><item><item key="GSE12777GSM320627"><item key="cell line">HCC1954</item><item key="cell type">Basal</item><item key="genotype">HER2 amplification</item></item></item><item><item key="GSE12777GSM320628"><item key="cell line">HCC2218</item><item key="cell type">Luminal</item><item key="genotype">HER2 amplification</item></item></item><item><item key="GSE12777GSM320629"><item key="cell line">HCC1500</item><item key="cell type">Luminal</item><item key="genotype">wild_type</item></item></item><item><item key="GSE12777GSM320630"><item key="cell line">HCC1395</item><item key="cell type">Basal</item><item key="genotype">wild_type</item></item></item><item><item key="GSE12777GSM320631"><item key="cell line">HCC1143</item><item key="cell type">Basal</item><item key="genotype">wild_type</item></item></item><item><item key="GSE12777GSM320632"><item key="cell line">HDQ-P1</item><item key="cell type">Basal</item><item key="genotype">wild_type</item></item></item><item><item key="GSE12777GSM320633"><item key="cell line">ZR75-30</item><item key="cell type">Luminal</item><item key="genotype">HER2 amplification</item></item></item><item><item key="GSE12777GSM320634"><item key="cell line">MFM-223</item><item key="cell type">Luminal</item><item key="genotype">HER2 amplification</item></item></item><item><item key="GSE12777GSM320635"><item key="cell line">HCC1569</item><item key="cell type">Basal</item><item key="genotype">HER2 amplification</item></item></item><item><item key="GSE12777GSM320636"><item key="cell line">HCC38</item><item key="cell type">Basal</item><item key="genotype">wild_type</item></item></item><item><item key="GSE12777GSM320637"><item key="cell line">CAL-148</item><item key="cell type">Basal</item><item key="genotype">wild_type</item></item></item><item><item key="GSE12777GSM320638"><item key="cell line">UACC-893</item><item key="cell type">Luminal</item><item key="genotype">HER2 amplification</item></item></item><item><item key="GSE12777GSM320639"><item key="cell line">JIMT-1</item><item key="cell type">Luminal</item><item key="genotype">HER2 amplification</item></item></item><item><item key="GSE12777GSM320640"><item key="cell line">SW527</item><item key="cell type">Basal</item><item key="genotype">wild_type</item></item></item></item><item key="id">3018</item><item key="pop_total">0</item><item key="platform">4</item><item key="summary_wrapped">Basal gene expression levels were determined by global gene expression profiling of breast cancer cell lines. Molecular subtype was...</item><item key="pubmed_id">19567590</item><item key="geo_gse_id">E-GEOD-12777</item><item key="owner_profile">/profile/8773/arrayexpressuploader</item><item key="factor_count">3</item><item key="sample_count">51</item><item key="tags"><item>basal</item><item>breast</item><item>breast cancer</item><item>cancer</item><item>cell</item><item>serum</item></item><item key="lastmodified">Dec.12, 2014</item><item key="is_default">False</item><item key="geo_id_plat">E-GEOD-12777_A-AFFY-44</item><item key="slug">transcription-profiling-by-array-of-human-breast-4</item><item key="geo_gds_id"/><item key="name">Transcription profiling by array of human breast cancer cell lines with or without HER2 amplification</item><item key="created">Sep.10, 2014</item><item key="summary">Basal gene expression levels were determined by global gene expression profiling of breast cancer cell lines. Molecular subtype was determined using gene expression and HER2 status assesses by HER2 FISH analysis. Experiment Overall Design: RNA was prepared from cell lines cultured in 10% fetal bovine serum</item><item key="source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-12777</item><item key="sample_source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-12777/samples/</item></data></biogps>
