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<biogps><data><item key="owner">ArrayExpress Uploader</item><item key="pop_total">0</item><item key="species">human</item><item key="factors"><item><item key="GSM309953"><item key="TOTAL RNA">extracted from xenografted 2MLN-GFP tumors.</item></item></item><item><item key="GSM309954"><item key="TOTAL RNA">extracted from xenografted 2MLN-dnTbRII tumors.</item></item></item></item><item key="id">2992</item><item key="ownerprofile_id">arrayexpress_sid</item><item key="platform">4</item><item key="summary_wrapped">Diffuse-type gastric carcinoma is a poor-prognostic cancer with high expression of transforming growth factor (TGF)-&#946; and thick stromal...</item><item key="geo_gse_id">E-GEOD-12336</item><item key="owner_profile">/profile/8773/arrayexpressuploader</item><item key="factor_count">1</item><item key="sample_count">2</item><item key="tags"><item>cancer</item><item>carcinoma</item><item>cell</item><item>gastric carcinoma</item></item><item key="lastmodified">Dec.12, 2014</item><item key="is_default">False</item><item key="geo_gds_id"/><item key="slug">gene-expression-analysis-of-tgf-beta-signaling-dis</item><item key="geo_id_plat">E-GEOD-12336_A-AFFY-44</item><item key="name">Gene expression analysis of TGF-beta signaling-disrupting gastric cancer cell line 2MLN</item><item key="created">Sep.10, 2014</item><item key="summary">Diffuse-type gastric carcinoma is a poor-prognostic cancer with high expression of transforming growth factor (TGF)-&#946; and thick stromal fibrosis. However, detailed investigations on the roles of TGF-&#946; signaling in diffuse-type gastric carcinoma have not been performed. We generated two diffuse-type gastric carcinoma cell lines, dominant-negative TGF-&#946; type II receptor expressing cells (2MLN-dnT&#946;RII) and GFP-expressing cells (2MLN-GFP). Cells were subcutaneously or orthotopically injected into nude mice. Although dnT&#946;RII did not affect the growth of OCUM-2MLN in vitro, it accelerated the growth of subcutaneously or orthotopically transplanted tumors in vivo. By microarray analysis, we found gene expression of TSP-1, an angiogenic inhibitor, was down-regulated in dnT&#946;RII tumors. This results suggested disruption of TGF-&#946; signaling in diffuse-type gastric carcinoma cells leads to alteration of tumor microenvironment and acceleration of tumor growth. We generated two OCUM-2MLN-derived gastric carcinoma cell lines; 2MLN-dnT&#946;RII, which expresses dominant negative form of T&#946;RII, and control 2MLN-GFP, which expresses GFP. The transplanted tumors of these cell lines were subjected to gene expression analysis with Affymetrix U133 plus2 arrays.</item><item key="source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-12336</item><item key="sample_source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-12336/samples/</item></data></biogps>
