<?xml version="1.0" encoding="ASCII"?>
<biogps><data><item key="owner">ArrayExpress Uploader</item><item key="pop_total">0</item><item key="id">2990</item><item key="factors"><item><item key="GSM309615"><item key="TRANSFECTION">not specified</item><item key="PROTOCOL">not specified</item></item></item><item><item key="GSM309615"><item key="TRANSFECTION">not specified</item><item key="PROTOCOL">not specified</item></item></item><item><item key="GSM309615"><item key="TRANSFECTION">not specified</item><item key="PROTOCOL">not specified</item></item></item><item><item key="GSM468448"><item key="TRANSFECTION">control siRNA</item><item key="PROTOCOL">control</item></item></item><item><item key="GSM468448"><item key="TRANSFECTION">control siRNA</item><item key="PROTOCOL">control</item></item></item><item><item key="GSM468450"><item key="TRANSFECTION">POU5F1 siRNA-1</item><item key="PROTOCOL">EWS-POU5F1 knockdown</item></item></item><item><item key="GSM468450"><item key="TRANSFECTION">POU5F1 siRNA-1</item><item key="PROTOCOL">EWS-POU5F1 knockdown</item></item></item><item><item key="GSM468452"><item key="TRANSFECTION">POU5F1 siRNA-2</item><item key="PROTOCOL">EWS-POU5F1 knockdown</item></item></item><item><item key="GSM468452"><item key="TRANSFECTION">POU5F1 siRNA-2</item><item key="PROTOCOL">EWS-POU5F1 knockdown</item></item></item></item><item key="ownerprofile_id">arrayexpress_sid</item><item key="platform">4</item><item key="summary_wrapped">Our objective is to clarify the function of EWS-POU5F1 chimera. Specifially, GBS6 cells were established from an undifferentiated bone...</item><item key="pubmed_id">20203285</item><item key="geo_gse_id">E-GEOD-12320</item><item key="owner_profile">/profile/8773/arrayexpressuploader</item><item key="factor_count">2</item><item key="sample_count">9</item><item key="tags"><item>bone</item><item>cell</item><item>line</item><item>sarcoma</item></item><item key="lastmodified">Dec.12, 2014</item><item key="is_default">False</item><item key="geo_gds_id"/><item key="slug">differential-gene-expression-in-gbs6-cells-after-e</item><item key="geo_id_plat">E-GEOD-12320_A-AFFY-44</item><item key="name">Differential gene expression in GBS6 cells after EWS-POU5F1 knockdown</item><item key="created">Sep.10, 2014</item><item key="summary">Our objective is to clarify the function of EWS-POU5F1 chimera. Specifially, GBS6 cells were established from an undifferentiated bone sarcoma carrying translocation t(6;22)(p21;q12). The translocation resulted in a gene fusion between EWS and POU5F1. Gene expression analysis of t(6;22) undifferentiated sarcoma cell line GBS6 transfected with POU5F1 specific siRNA to investigate the function of EWS-POU5F1. Knockdown of EWS-POU5F1 using POU5F1 specific siRNAs. 3 control and 6 experimental replicates representing the same experiment repeated 3 times (1st, 2nd, 3rd).</item><item key="source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-12320</item><item key="species">human</item><item key="sample_source">http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-12320/samples/</item></data></biogps>
