Dataset: Transcription profiling of mouse Ngn3 expressing cells and endocrine pancreatic cells from wild type and Ngn3 mutant animals at day 15 of embryonic development
The basic helix-loop-helix transcription factor Neurogenin3 (Ngn3/Neurog3) is expressed in endocrine progenitor cells in the embryonic...
The basic helix-loop-helix transcription factor Neurogenin3 (Ngn3/Neurog3) is expressed in endocrine progenitor cells in the embryonic mouse pancreas. Ngn3 controls endocrine cell fate decisions. Ngn3 deficient mice do not develop any pancreatic endocrine cells, including insulin producing beta cells, and die postnatally from diabetes. Therefore, the characterization of gene expression in Ngn3-expressing cells and their progeny is of particular interest for the development of novel strategies for cell replacement therapies in type-1 diabetes. Here we describe two studies. In the first study (8 assays) we used mice where the EYFP (Enhanced Yellow fluorescent Protein) is expressed under the control of Ngn3 regulatory elements (knock add on strategy). EYFP-positive, Ngn3-expressing cells, were FACS sorted from embryonic pancreas at day 15.5 (E15.5), as well as EYFP-negative cells. In the second study (6 assays) we compared wild-type and Ngn3 mutant pancreas at E15.5. All samples were hybridized to Affymetrix GeneChip Mouse Genome 430.2.0 array.
- Species:
- mouse
- Samples:
- 14
- Source:
- E-CBIL-48
- Updated:
- Dec.12, 2014
- Registered:
- Nov.24, 2014
Sample | Tissue or Cell Type | Genetic Modification |
---|---|---|
Ngn3 EYFP+ panc - Mouse Embryo rep1 | EYFP+ cells | Ngn3 IRES-YFP knock add on |
Ngn3 EYFP+ panc - Mouse Embryo rep1 | EYFP+ cells | Ngn3 IRES-YFP knock add on |
Ngn3 EYFP+ panc - Mouse Embryo rep1 | EYFP+ cells | Ngn3 IRES-YFP knock add on |
Ngn3 EYFP+ panc - Mouse Embryo rep1 | EYFP+ cells | Ngn3 IRES-YFP knock add on |
Ngn3 EYFP- panc - Mouse Embryo rep1 | EYFP- cells | Ngn3 IRES-YFP knock add on |
Ngn3 EYFP- panc - Mouse Embryo rep1 | EYFP- cells | Ngn3 IRES-YFP knock add on |
Ngn3 EYFP- panc - Mouse Embryo rep1 | EYFP- cells | Ngn3 IRES-YFP knock add on |
Ngn3 EYFP- panc - Mouse Embryo rep1 | EYFP- cells | Ngn3 IRES-YFP knock add on |
Ngn3 KO panc - Mouse Embryo rep1 | pancreas | Ngn3 KO |
Ngn3 KO panc - Mouse Embryo rep1 | pancreas | Ngn3 KO |
Ngn3 KO panc - Mouse Embryo rep1 | pancreas | Ngn3 KO |
Ngn3 WT panc - Mouse Embryo rep1 | pancreas | Wild Type |
Ngn3 WT panc - Mouse Embryo rep1 | pancreas | Wild Type |
Ngn3 WT panc - Mouse Embryo rep1 | pancreas | Wild Type |