{"owner": "ERCC", "ownerprofile_id": "ercc_sid", "id": 10039, "factors": [{"11020": {"Cell Culture Source": "Not Applicable", "Biofluid Name": "Plasma", "Anatomical Location": "Entire cardiovascular system", "Transcriptome Reads": "542,550", "Profiling Assay": "smRNA-Seq", "Transcriptome Genome Ratio": "0.896134", "Reference Genome Reads": "605,434", "Meets ERCC QC?": "YES", "Biosample Metadata ID": "EXR-JFREE11020-BS", "RNA Isolation Kit": "miRcury biofluids (Exiqon)", "exRNA Source": "total cell-free biofluid RNA", "Condition": "Cardiovascular Disorder"}}, {"11066": {"Cell Culture Source": "Not Applicable", "Biofluid Name": "Plasma", "Anatomical Location": "Entire cardiovascular system", "Transcriptome Reads": "269,652", "Profiling Assay": "smRNA-Seq", "Transcriptome Genome Ratio": "0.866619", "Reference Genome Reads": "311,154", "Meets ERCC QC?": "YES", "Biosample Metadata ID": "EXR-JFREE11066-BS", "RNA Isolation Kit": "miRcury biofluids (Exiqon)", "exRNA Source": "total cell-free biofluid RNA", "Condition": "Healthy Control"}}, {"11095": {"Cell Culture Source": "Not Applicable", "Biofluid Name": "Plasma", "Anatomical Location": "Entire cardiovascular system", "Transcriptome Reads": "333,771", "Profiling Assay": "smRNA-Seq", "Transcriptome Genome Ratio": "0.86556", "Reference Genome Reads": "385,613", "Meets ERCC QC?": "YES", "Biosample Metadata ID": "EXR-JFREE11095-BS", "RNA Isolation Kit": "miRcury biofluids (Exiqon)", "exRNA Source": "total cell-free biofluid RNA", "Condition": "Healthy Control"}}, {"11120": {"Cell Culture Source": "Not Applicable", "Biofluid Name": "Plasma", "Anatomical Location": "Entire cardiovascular system", "Transcriptome Reads": "166,607", "Profiling Assay": "smRNA-Seq", "Transcriptome Genome Ratio": "0.906389", "Reference Genome Reads": "183,814", "Meets ERCC QC?": "YES", "Biosample Metadata ID": "EXR-JFREE11120-BS", "RNA Isolation Kit": "miRcury biofluids (Exiqon)", "exRNA Source": "total cell-free biofluid RNA", "Condition": "Healthy Control"}}, {"11430": {"Cell Culture Source": "Not Applicable", "Biofluid Name": "Plasma", "Anatomical Location": "Entire cardiovascular system", "Transcriptome Reads": "731,229", "Profiling Assay": "smRNA-Seq", "Transcriptome Genome Ratio": "0.8688", "Reference Genome Reads": "841,645", "Meets ERCC QC?": "YES", "Biosample Metadata ID": "EXR-JFREE11430-BS", "RNA Isolation Kit": "miRcury biofluids (Exiqon)", "exRNA Source": "total cell-free biofluid RNA", "Condition": "Cardiovascular Disorder"}}, {"11579": {"Cell Culture Source": "Not Applicable", "Biofluid Name": "Plasma", "Anatomical Location": "Entire cardiovascular system", "Transcriptome Reads": "183,753", "Profiling Assay": "smRNA-Seq", "Transcriptome Genome Ratio": "0.746617", "Reference Genome Reads": "246,114", "Meets ERCC QC?": "YES", "Biosample Metadata ID": "EXR-JFREE11579-BS", "RNA Isolation Kit": "miRcury biofluids (Exiqon)", "exRNA Source": "total cell-free biofluid RNA", "Condition": "Cardiovascular Disorder"}}, {"11610": {"Cell Culture Source": "Not Applicable", "Biofluid Name": "Plasma", "Anatomical Location": "Entire cardiovascular system", "Transcriptome Reads": "1,007,685", "Profiling Assay": "smRNA-Seq", "Transcriptome Genome Ratio": "0.93647", "Reference Genome Reads": "1,076,046", "Meets ERCC QC?": "YES", "Biosample Metadata ID": "EXR-JFREE11610-BS", "RNA Isolation Kit": "miRcury biofluids (Exiqon)", "exRNA Source": "total cell-free biofluid RNA", "Condition": "Cardiovascular Disorder"}}, {"10172": {"Cell Culture Source": "Not Applicable", "Biofluid Name": "Plasma", "Anatomical Location": "Entire cardiovascular system", "Transcriptome Reads": "276,109", "Profiling Assay": "smRNA-Seq", "Transcriptome Genome Ratio": "0.768581", "Reference Genome Reads": "359,245", "Meets ERCC QC?": "YES", "Biosample Metadata ID": "EXR-JFREE10172-BS", "RNA Isolation Kit": "miRcury biofluids (Exiqon)", "exRNA Source": "total cell-free biofluid RNA", "Condition": "Cardiovascular Disorder"}}, {"10216": {"Cell Culture Source": "Not Applicable", "Biofluid Name": "Plasma", "Anatomical Location": "Entire cardiovascular system", "Transcriptome Reads": "1,500,424", "Profiling Assay": "smRNA-Seq", "Transcriptome Genome Ratio": "0.945584", "Reference Genome Reads": "1,586,770", "Meets ERCC QC?": "YES", "Biosample Metadata ID": "EXR-JFREE10216-BS", "RNA Isolation Kit": "miRcury biofluids (Exiqon)", "exRNA Source": "total cell-free biofluid RNA", "Condition": "Healthy Control"}}, {"10021": {"Cell Culture Source": "Not Applicable", "Biofluid Name": "Plasma", "Anatomical Location": "Entire cardiovascular system", "Transcriptome Reads": "210,235", "Profiling Assay": "smRNA-Seq", "Transcriptome Genome Ratio": "0.83462", "Reference Genome Reads": "251,893", "Meets ERCC QC?": "YES", "Biosample Metadata ID": "EXR-JFREE10021-BS", "RNA Isolation Kit": "miRcury biofluids (Exiqon)", "exRNA Source": "total cell-free biofluid RNA", "Condition": "Healthy Control"}}, {"12303": {"Cell Culture Source": "Not Applicable", "Biofluid Name": "Plasma", "Anatomical Location": "Entire cardiovascular system", "Transcriptome Reads": "211,627", "Profiling Assay": "smRNA-Seq", "Transcriptome Genome Ratio": "0.788773", "Reference Genome Reads": "268,299", "Meets ERCC QC?": "YES", "Biosample Metadata ID": "EXR-JFREE12303-BS", "RNA Isolation Kit": "miRcury biofluids (Exiqon)", "exRNA Source": "total cell-free biofluid RNA", "Condition": "Healthy Control"}}, {"12616": {"Cell Culture Source": "Not Applicable", "Biofluid Name": "Plasma", "Anatomical Location": "Entire cardiovascular system", "Transcriptome Reads": "130,701", "Profiling Assay": "smRNA-Seq", "Transcriptome Genome Ratio": "0.790398", "Reference Genome Reads": "165,361", "Meets ERCC QC?": "YES", "Biosample Metadata ID": "EXR-JFREE12616-BS", "RNA Isolation Kit": "miRcury biofluids (Exiqon)", "exRNA Source": "total cell-free biofluid RNA", "Condition": "Healthy Control"}}, {"12768": {"Cell Culture Source": "Not Applicable", "Biofluid Name": "Plasma", "Anatomical Location": "Entire cardiovascular system", "Transcriptome Reads": "1,249,385", "Profiling Assay": "smRNA-Seq", "Transcriptome Genome Ratio": "0.953922", "Reference Genome Reads": "1,309,735", "Meets ERCC QC?": "YES", "Biosample Metadata ID": "EXR-JFREE12768-BS", "RNA Isolation Kit": "miRcury biofluids (Exiqon)", "exRNA Source": "total cell-free biofluid RNA", "Condition": "Cardiovascular Disorder"}}, {"12918": {"Cell Culture Source": "Not Applicable", "Biofluid Name": "Plasma", "Anatomical Location": "Entire cardiovascular system", "Transcriptome Reads": "1,095,028", "Profiling Assay": "smRNA-Seq", "Transcriptome Genome Ratio": "0.938385", "Reference Genome Reads": "1,166,928", "Meets ERCC QC?": "YES", "Biosample Metadata ID": "EXR-JFREE12918-BS", "RNA Isolation Kit": "miRcury biofluids (Exiqon)", "exRNA Source": "total cell-free biofluid RNA", "Condition": "Healthy Control"}}, {"12938": {"Cell Culture Source": "Not Applicable", "Biofluid Name": "Plasma", "Anatomical Location": "Entire cardiovascular system", "Transcriptome Reads": "88,318", "Profiling Assay": "smRNA-Seq", "Transcriptome Genome Ratio": "0.716815", "Reference Genome Reads": "123,209", "Meets ERCC QC?": "NO", "Biosample Metadata ID": "EXR-JFREE12938-BS", "RNA Isolation Kit": "miRcury biofluids (Exiqon)", "exRNA Source": "total cell-free biofluid RNA", "Condition": "Cardiovascular Disorder"}}, {"13132": {"Cell Culture Source": "Not Applicable", "Biofluid Name": "Plasma", "Anatomical Location": "Entire cardiovascular system", "Transcriptome Reads": "177,265", "Profiling Assay": "smRNA-Seq", "Transcriptome Genome Ratio": "0.826711", "Reference Genome Reads": "214,422", "Meets ERCC QC?": "YES", "Biosample Metadata ID": "EXR-JFREE13132-BS", "RNA Isolation Kit": "miRcury biofluids (Exiqon)", "exRNA Source": "total cell-free biofluid RNA", "Condition": "Healthy Control"}}, {"13170": {"Cell Culture Source": "Not Applicable", "Biofluid Name": "Plasma", "Anatomical Location": "Entire cardiovascular system", "Transcriptome Reads": "76,519", "Profiling Assay": "smRNA-Seq", "Transcriptome Genome Ratio": "0.751055", "Reference Genome Reads": "101,882", "Meets ERCC QC?": "NO", "Biosample Metadata ID": "EXR-JFREE13170-BS", "RNA Isolation Kit": "miRcury biofluids (Exiqon)", "exRNA Source": "total cell-free biofluid RNA", "Condition": "Healthy Control"}}, {"10320": {"Cell Culture Source": "Not Applicable", "Biofluid Name": "Plasma", "Anatomical Location": "Entire cardiovascular system", "Transcriptome Reads": "812,926", "Profiling Assay": "smRNA-Seq", "Transcriptome Genome Ratio": "0.946026", "Reference Genome Reads": "859,306", "Meets ERCC QC?": "YES", "Biosample Metadata ID": "EXR-JFREE10320-BS", "RNA Isolation Kit": "miRcury biofluids (Exiqon)", "exRNA Source": "total cell-free biofluid RNA", "Condition": "Healthy Control"}}, {"13392": {"Cell Culture Source": "Not Applicable", "Biofluid Name": "Plasma", "Anatomical Location": "Entire cardiovascular system", "Transcriptome Reads": "243,884", "Profiling Assay": "smRNA-Seq", "Transcriptome Genome Ratio": "0.838254", "Reference Genome Reads": "290,943", "Meets ERCC QC?": "YES", "Biosample Metadata ID": "EXR-JFREE13392-BS", "RNA Isolation Kit": "miRcury biofluids (Exiqon)", "exRNA Source": "total cell-free biofluid RNA", "Condition": "Cardiovascular Disorder"}}, {"13464": {"Cell Culture Source": "Not Applicable", "Biofluid Name": "Plasma", "Anatomical Location": "Entire cardiovascular system", "Transcriptome Reads": "59,670", "Profiling Assay": "smRNA-Seq", "Transcriptome Genome Ratio": "0.713995", "Reference Genome Reads": "83,572", "Meets ERCC QC?": "NO", "Biosample Metadata ID": "EXR-JFREE13464-BS", "RNA Isolation Kit": "miRcury biofluids (Exiqon)", "exRNA Source": "total cell-free biofluid RNA", "Condition": "Healthy Control"}}, {"13713": {"Cell Culture Source": "Not Applicable", "Biofluid Name": "Plasma", "Anatomical Location": "Entire cardiovascular system", "Transcriptome Reads": "148,945", "Profiling Assay": "smRNA-Seq", "Transcriptome Genome Ratio": "0.822151", "Reference Genome Reads": "181,165", "Meets ERCC QC?": "YES", "Biosample Metadata ID": "EXR-JFREE13713-BS", "RNA Isolation Kit": "miRcury biofluids (Exiqon)", "exRNA Source": "total cell-free biofluid RNA", "Condition": "Cardiovascular Disorder"}}, {"14043": {"Cell Culture Source": "Not Applicable", "Biofluid Name": "Plasma", "Anatomical Location": "Entire cardiovascular system", "Transcriptome Reads": "177,837", "Profiling Assay": "smRNA-Seq", "Transcriptome Genome Ratio": "0.834504", "Reference Genome Reads": "213,105", "Meets ERCC QC?": "YES", "Biosample Metadata ID": "EXR-JFREE14043-BS", "RNA Isolation Kit": "miRcury biofluids (Exiqon)", "exRNA Source": "total cell-free biofluid RNA", "Condition": "Cardiovascular Disorder"}}, {"14820": {"Cell Culture Source": "Not Applicable", "Biofluid Name": "Plasma", "Anatomical Location": "Entire cardiovascular system", "Transcriptome Reads": "175,885", "Profiling Assay": "smRNA-Seq", "Transcriptome Genome Ratio": "0.80196", "Reference Genome Reads": "219,319", "Meets ERCC QC?": "YES", "Biosample Metadata ID": "EXR-JFREE14820-BS", "RNA Isolation Kit": "miRcury biofluids (Exiqon)", "exRNA Source": "total cell-free biofluid RNA", "Condition": "Healthy Control"}}, {"14912": {"Cell Culture Source": "Not Applicable", "Biofluid Name": "Plasma", "Anatomical Location": "Entire cardiovascular system", "Transcriptome Reads": "46,449", "Profiling Assay": "smRNA-Seq", "Transcriptome Genome Ratio": "0.701753", "Reference Genome Reads": "66,190", "Meets ERCC QC?": "NO", "Biosample Metadata ID": "EXR-JFREE14912-BS", "RNA Isolation Kit": "miRcury biofluids (Exiqon)", "exRNA Source": "total cell-free biofluid RNA", "Condition": "Cardiovascular Disorder"}}, {"10500": {"Cell Culture Source": "Not Applicable", "Biofluid Name": "Plasma", "Anatomical Location": "Entire cardiovascular system", "Transcriptome Reads": "90,586", "Profiling Assay": "smRNA-Seq", "Transcriptome Genome Ratio": "0.689864", "Reference Genome Reads": "131,310", "Meets ERCC QC?": "NO", "Biosample Metadata ID": "EXR-JFREE10500-BS", "RNA Isolation Kit": "miRcury biofluids (Exiqon)", "exRNA Source": "total cell-free biofluid RNA", "Condition": "Healthy Control"}}, {"15237": {"Cell Culture Source": "Not Applicable", "Biofluid Name": "Plasma", "Anatomical Location": "Entire cardiovascular system", "Transcriptome Reads": "151,001", "Profiling Assay": "smRNA-Seq", "Transcriptome Genome Ratio": "0.822248", "Reference Genome Reads": "183,644", "Meets ERCC QC?": "YES", "Biosample Metadata ID": "EXR-JFREE15237-BS", "RNA Isolation Kit": "miRcury biofluids (Exiqon)", "exRNA Source": "total cell-free biofluid RNA", "Condition": "Cardiovascular Disorder"}}, {"10543": {"Cell Culture Source": "Not Applicable", "Biofluid Name": "Plasma", "Anatomical Location": "Entire cardiovascular system", "Transcriptome Reads": "91,811", "Profiling Assay": "smRNA-Seq", "Transcriptome Genome Ratio": "0.757923", "Reference Genome Reads": "121,135", "Meets ERCC QC?": "NO", "Biosample Metadata ID": "EXR-JFREE10543-BS", "RNA Isolation Kit": "miRcury biofluids (Exiqon)", "exRNA Source": "total cell-free biofluid RNA", "Condition": "Cardiovascular Disorder"}}, {"10590": {"Cell Culture Source": "Not Applicable", "Biofluid Name": "Plasma", "Anatomical Location": "Entire cardiovascular system", "Transcriptome Reads": "150,126", "Profiling Assay": "smRNA-Seq", "Transcriptome Genome Ratio": "0.842146", "Reference Genome Reads": "178,266", "Meets ERCC QC?": "YES", "Biosample Metadata ID": "EXR-JFREE10590-BS", "RNA Isolation Kit": "miRcury biofluids (Exiqon)", "exRNA Source": "total cell-free biofluid RNA", "Condition": "Healthy Control"}}, {"16077": {"Cell Culture Source": "Not Applicable", "Biofluid Name": "Plasma", "Anatomical Location": "Entire cardiovascular system", "Transcriptome Reads": "1,378,861", "Profiling Assay": "smRNA-Seq", "Transcriptome Genome Ratio": "0.953763", "Reference Genome Reads": "1,445,706", "Meets ERCC QC?": "YES", "Biosample Metadata ID": "EXR-JFREE16077-BS", "RNA Isolation Kit": "miRcury biofluids (Exiqon)", "exRNA Source": "total cell-free biofluid RNA", "Condition": "Healthy Control"}}, {"16136": {"Cell Culture Source": "Not Applicable", "Biofluid Name": "Plasma", "Anatomical Location": "Entire cardiovascular system", "Transcriptome Reads": "156,354", "Profiling Assay": "smRNA-Seq", "Transcriptome Genome Ratio": "0.825893", "Reference Genome Reads": "189,315", "Meets ERCC QC?": "YES", "Biosample Metadata ID": "EXR-JFREE16136-BS", "RNA Isolation Kit": "miRcury biofluids (Exiqon)", "exRNA Source": "total cell-free biofluid RNA", "Condition": "Cardiovascular Disorder"}}, {"16355": {"Cell Culture Source": "Not Applicable", "Biofluid Name": "Plasma", "Anatomical Location": "Entire cardiovascular system", "Transcriptome Reads": "727,498", "Profiling Assay": "smRNA-Seq", "Transcriptome Genome Ratio": "0.908901", "Reference Genome Reads": "800,415", "Meets ERCC QC?": "YES", "Biosample Metadata ID": "EXR-JFREE16355-BS", "RNA Isolation Kit": "miRcury biofluids (Exiqon)", "exRNA Source": "total cell-free biofluid RNA", "Condition": "Cardiovascular Disorder"}}, {"16684": {"Cell Culture Source": "Not Applicable", "Biofluid Name": "Plasma", "Anatomical Location": "Entire cardiovascular system", "Transcriptome Reads": "294,681", "Profiling Assay": "smRNA-Seq", "Transcriptome Genome Ratio": "0.825828", "Reference Genome Reads": "356,831", "Meets ERCC QC?": "YES", "Biosample Metadata ID": "EXR-JFREE16684-BS32", "RNA Isolation Kit": "miRcury biofluids (Exiqon)", "exRNA Source": "total cell-free biofluid RNA", "Condition": "Cardiovascular Disorder"}}, {"16758": {"Cell Culture Source": "Not Applicable", "Biofluid Name": "Plasma", "Anatomical Location": "Entire cardiovascular system", "Transcriptome Reads": "185,579", "Profiling Assay": "smRNA-Seq", "Transcriptome Genome Ratio": "0.766947", "Reference Genome Reads": "241,971", "Meets ERCC QC?": "YES", "Biosample Metadata ID": "EXR-JFREE16758-BS", "RNA Isolation Kit": "miRcury biofluids (Exiqon)", "exRNA Source": "total cell-free biofluid RNA", "Condition": "Cardiovascular Disorder"}}, {"10676": {"Cell Culture Source": "Not Applicable", "Biofluid Name": "Plasma", "Anatomical Location": "Entire cardiovascular system", "Transcriptome Reads": "1,031,504", "Profiling Assay": "smRNA-Seq", "Transcriptome Genome Ratio": "0.943756", "Reference Genome Reads": "1,092,977", "Meets ERCC QC?": "YES", "Biosample Metadata ID": "EXR-JFREE10676-BS", "RNA Isolation Kit": "miRcury biofluids (Exiqon)", "exRNA Source": "total cell-free biofluid RNA", "Condition": "Cardiovascular Disorder"}}, {"16926": {"Cell Culture Source": "Not Applicable", "Biofluid Name": "Plasma", "Anatomical Location": "Entire cardiovascular system", "Transcriptome Reads": "178,532", "Profiling Assay": "smRNA-Seq", "Transcriptome Genome Ratio": "0.868186", "Reference Genome Reads": "205,638", "Meets ERCC QC?": "YES", "Biosample Metadata ID": "EXR-JFREE16926-BS", "RNA Isolation Kit": "miRcury biofluids (Exiqon)", "exRNA Source": "total cell-free biofluid RNA", "Condition": "Healthy Control"}}, {"17138": {"Cell Culture Source": "Not Applicable", "Biofluid Name": "Plasma", "Anatomical Location": "Entire cardiovascular system", "Transcriptome Reads": "295,317", "Profiling Assay": "smRNA-Seq", "Transcriptome Genome Ratio": "0.804494", "Reference Genome Reads": "367,084", "Meets ERCC QC?": "YES", "Biosample Metadata ID": "EXR-JFREE17138-BS", "RNA Isolation Kit": "miRcury biofluids (Exiqon)", "exRNA Source": "total cell-free biofluid RNA", "Condition": "Cardiovascular Disorder"}}, {"17226": {"Cell Culture Source": "Not Applicable", "Biofluid Name": "Plasma", "Anatomical Location": "Entire cardiovascular system", "Transcriptome Reads": "466,364", "Profiling Assay": "smRNA-Seq", "Transcriptome Genome Ratio": "0.765965", "Reference Genome Reads": "608,858", "Meets ERCC QC?": "YES", "Biosample Metadata ID": "EXR-JFREE17226-BS", "RNA Isolation Kit": "miRcury biofluids (Exiqon)", "exRNA Source": "total cell-free biofluid RNA", "Condition": "Healthy Control"}}, {"10728": {"Cell Culture Source": "Not Applicable", "Biofluid Name": "Plasma", "Anatomical Location": "Entire cardiovascular system", "Transcriptome Reads": "128,725", "Profiling Assay": "smRNA-Seq", "Transcriptome Genome Ratio": "0.770573", "Reference Genome Reads": "167,051", "Meets ERCC QC?": "YES", "Biosample Metadata ID": "EXR-JFREE10728-BS", "RNA Isolation Kit": "miRcury biofluids (Exiqon)", "exRNA Source": "total cell-free biofluid RNA", "Condition": "Cardiovascular Disorder"}}, {"17326": {"Cell Culture Source": "Not Applicable", "Biofluid Name": "Plasma", "Anatomical Location": "Entire cardiovascular system", "Transcriptome Reads": "139,705", "Profiling Assay": "smRNA-Seq", "Transcriptome Genome Ratio": "0.750356", "Reference Genome Reads": "186,185", "Meets ERCC QC?": "YES", "Biosample Metadata ID": "EXR-JFREE17326-BS", "RNA Isolation Kit": "miRcury biofluids (Exiqon)", "exRNA Source": "total cell-free biofluid RNA", "Condition": "Healthy Control"}}], "pop_total": 0, "platform": 21, "summary_wrapped": "Extracellular RNA from the plasma of 40 individuals from the Framingham Heart Study were isolated using miRCURY RNA isolation kit...", "pubmed_id": "27112789", "owner_profile": "/profile/10501/ercc", "factor_count": 13, "sample_count": 39, "tags": [], "sample_geneid": "406961", "lastmodified": "Apr.05, 2017", "is_default": false, "geo_gds_id": "unknown", "slug": "uh2-40-samples-seq-2", "geo_id_plat": "unknown", "name": "UH2 40 Samples Seq", "created": "Apr.04, 2017", "summary": "Extracellular RNA from the plasma of 40 individuals from the Framingham Heart Study were isolated using miRCURY RNA isolation kit Biofluids (Exiqon). Small RNA Library preparation was done with Ion Total RNA-Seq Kit v2 (Thermo Fisher Scientific) and the samples were sequenced with the Ion Proton. This is a dataset provided from Extracellular RNA Communication consortium (ERCC). More details is available at <a href=\"http://exrna-atlas.org/exat/datasets\">http://exrna-atlas.org/exat/datasets</a>.", "geo_gse_id": "BDS_00022", "species": "human"}